Gene Tpau_2596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2596 
Symbol 
ID9156757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp2695259 
End bp2695924 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003647538 
Protein GI296140295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.269859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCCT CCCGAACTGC ACGCGAACGC GCCCGCGCCG AAATCACCGC GGAAATCACC 
GCACGCGCCC GCGAGCAACT CCGCGACGTC GGGGCCGCCG CACTGTCACT GCGAGCCGTC 
GCACGCGACC TTGGGCTGGC ATCGTCCGCG GTGTACCGAT ACTTCCCCAG CCGCGACGCT 
TTGCTCACCG CACTCATCAC CGACGCCTAC ACCGCGCTCG GTGACGCCGT GGAGCAGGCG 
GACGCGGCGG CGAGCACACC GCGTGAACGC TGGCGTGCCT GCGGCCACGC CGTCCGGAAC 
TGGGCCCGCG ACCATCCGCA CGAGTACGCC CTGATCTTCG GCTCTCCCGT GCCCGGCTAT 
GCCGCGCCGC GTGCGACCAT CGCCGCCGCG ATCCGCACCT CGGGCACATT CGCCCGCATC 
GCGGCCGACG GACACGGCGA GCCCCCGGAG GTCACCGACG AGCTGCGGTC ACAGCTGGAC 
GAGATCGCCG AAGCCGTTGC CCCCGAGGCA GACCGGAATC AGCTCGCGCT CGGCGTGCTC 
GCGTGGACCC AGCTCTTCGG AATCGTCAGT TTCGAAATCT TCGGCCAGTT CGCGAACACC 
CTTGACCCCG CAGACGAGTT CTTCGGCTAC GCACTTGATC GAATCGCGAA CCAGTTGGGA 
CTCTGA
 
Protein sequence
MNASRTARER ARAEITAEIT ARAREQLRDV GAAALSLRAV ARDLGLASSA VYRYFPSRDA 
LLTALITDAY TALGDAVEQA DAAASTPRER WRACGHAVRN WARDHPHEYA LIFGSPVPGY 
AAPRATIAAA IRTSGTFARI AADGHGEPPE VTDELRSQLD EIAEAVAPEA DRNQLALGVL 
AWTQLFGIVS FEIFGQFANT LDPADEFFGY ALDRIANQLG L