Gene Tpau_2587 details

Gene Information

• Locus tag: Tpau_2587
• ID: 9156748
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2685663
• End bp: 2687639
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 70%
• Product: glucose-methanol-choline oxidoreductase
• Protein accession: YP_003647529
• Protein GI: 296140286

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCTGT CCACCAGGCA GCGCGCGACG CTCTCGGCGA TCGTGGACAC GTTCGCCCCG 
GGCGACGGGG TGGCGATCCC CTCGGCCAGC GATCTCCGCG CCGGCGACCT GGCGGTTTCC 
TATGCGATGC GCAGCCCGCG GGACAGCGAC GGCATGTCCC TGTCGCAATC GCTGTCGCTG 
TTCGATAACC GGGTGTTCTG CGCCACCGTC CTCGGAACCC GCGGGCAACG GTTCGCCGAC 
CTGTCCTTCG CCGACCGGGA ACGGATCCTG ATCGACCTGT CGCGGTCGCG GTTCAGCCAG 
AAGCGGATGC TGTTCAAGCG GCTGCGGAAC ATCGCGCTAC TGGCCTACTA CACCGCGGGG 
GGCGCCGACG GCAACCACGG TCCGGGGGCC GATCTGATGG CGGCGATCGG TTACCCACCG 
CAGACGCCGC ACAAGAAGCC GCGCGGCCGA GCGATGCGGG CGTTGCGTCC GCTCACCCCC 
ACTCGGTACG AGATCGACGC CACGACGGCC TGTGATGTCG TGGTGGTCGG CTCCGGTGCC 
GGCGGTTCGG TGGCCGCGGC GCAACTCGCC GAAGCCGGTC TCGACGTCAT CGTGCTCGAA 
CGCGGCGAGT ACGTGGCCCC GTCGGATATG GGCGGAACCG ATCTGGACGG CCTATCGAAC 
CTGTTCGCGC CCAGCCCCTT CTGGACCGAG AACGCCCAGT CCTTCCTCCT GTCCGCGAAC 
TGCCTCGGCG GCGGCACCGT GGCCTCGCAC GGCGGCTACT TCCGTCCCTC CGAGGCCGTG 
CTGGCCGATT GGTCCGCCCG CGGTGTGGAC ACCGGCCCCG ATTTCGACGC CGCACTCGAT 
GCGGTGTGGC AGCGGGTCGG CGTCACCTCG TCGATGAGCG CCCCCGCACC CCGTGACGAA 
CTCCTGGAGA AGGGGTGCCG CGATCTGGGC CTGCCCGTGC ACACGGTGCA GCGCGCCGTG 
GACAACAACT GTGATCAGGG CGTCGAGTGC GGCCGCTGCG GCTTGGGGTG TCGCATCGGC 
GCGAAACACG ACGCGGGACG CACGTGGCTG CGCGACGCCG AGAAGCGGGG CGCTCGGATC 
GTGACCGGCG CACAGGCCCG GTCGATCGAG GTGCAGGGCA ACCGGGCCCG GAGCGTCGTC 
GCCCGCACCT CCGGCGGTTC CTGGCTGACG GTGCGGTGCA GCGCGGTGGT CGTGGCCGCC 
GGCGCGTTCG AGACCCCTGC GCTTTTGGCC CGGTCGGGCC TGGGCGGGCA GCACGTGGGC 
AAACACCTGC ACCTGCATCC CACCGCCACG GCGCTCGGGG TGTTCAGTGA CGTGGTGGCG 
CCCTGGTACG GCACCACCTC GGCCCGATAC AGCGATGCGC ACGCCGATCT CGACGGCAGC 
GGTTTCGGGG TGATCTACGA GACCGCACCG GTGACTCCGG CGGTGGCGTC GAGCTATGTG 
CCATGGCGCA ATGCCGGCGA GCACCTCAAC GTGATGCGCC AGCTTCCGCA CCTGTCGCTG 
CTGCGGGTGG TGTTGCGCGA TCGCGGTTCC GGCGAGGTGA TGATGGACTC GTCGGGCGAG 
CCGTCGGTGC GTTACGACCT CGCGGAGGCG GATCGGGCGC ACCTGCGCAC CGGCGTCGAC 
ACCGCTGTGC GGATCTTGGA AGCTGCCGGT GCGCGACGAA TCTTCACCGG TCAGCAGTGT 
GGGGGCGATT ACGTCCCCGG CGACCAGCCC ATCGAGGGGT TCCTGGGCCG CTCGCATTCC 
GCTGGCTACG GCGTCGGCGA GATCGCGCTG GCCTCCTTCG AGGCGATGAG CACCGTCCGC 
ATGGCTGCGT CGTCCAAGCG CGGCGCTGCC GACCCCGACG GTGCCCTGTG GGACGCGCCG 
AACATCGTGA TCGCCGACGC GTCGATGTTG CCGACGGCCA GTGGCGTGCA CCCCGCCGGG 
GTCATCCAGG CGCTGGCGCT GCGTAATGCT CGGGCGTTGG CCACCCGGCT CGGCTAA 

 

Protein sequence

MDLSTRQRAT LSAIVDTFAP GDGVAIPSAS DLRAGDLAVS YAMRSPRDSD GMSLSQSLSL 
FDNRVFCATV LGTRGQRFAD LSFADRERIL IDLSRSRFSQ KRMLFKRLRN IALLAYYTAG 
GADGNHGPGA DLMAAIGYPP QTPHKKPRGR AMRALRPLTP TRYEIDATTA CDVVVVGSGA 
GGSVAAAQLA EAGLDVIVLE RGEYVAPSDM GGTDLDGLSN LFAPSPFWTE NAQSFLLSAN 
CLGGGTVASH GGYFRPSEAV LADWSARGVD TGPDFDAALD AVWQRVGVTS SMSAPAPRDE 
LLEKGCRDLG LPVHTVQRAV DNNCDQGVEC GRCGLGCRIG AKHDAGRTWL RDAEKRGARI 
VTGAQARSIE VQGNRARSVV ARTSGGSWLT VRCSAVVVAA GAFETPALLA RSGLGGQHVG 
KHLHLHPTAT ALGVFSDVVA PWYGTTSARY SDAHADLDGS GFGVIYETAP VTPAVASSYV 
PWRNAGEHLN VMRQLPHLSL LRVVLRDRGS GEVMMDSSGE PSVRYDLAEA DRAHLRTGVD 
TAVRILEAAG ARRIFTGQQC GGDYVPGDQP IEGFLGRSHS AGYGVGEIAL ASFEAMSTVR 
MAASSKRGAA DPDGALWDAP NIVIADASML PTASGVHPAG VIQALALRNA RALATRLG