Gene Tpau_2550 details

Gene Information

• Locus tag: Tpau_2550
• ID: 9156711
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 2642879
• End bp: 2644906
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 67%
• Product: excinuclease ABC, C subunit
• Protein accession: YP_003647492
• Protein GI: 296140249

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.295738
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCGACC CGCAGAGTTA CCGTCCCGCA CCGGGGACGA TCCCCACCCA GCCCGGTGTG 
TACAAGTTCC GGGACAAGCA TGGCCGCGTG ATCTACGTGG GCAAGGCCAA GTCGCTGCGC 
AGCCGCCTCA ACTCGTACTT CGCCGATGTC TACGGCCTGC ACCCGCGCAC GTATCAGATG 
GTGACCACGG CTGCCTCGGT GGAGTGGACC GTCGTCAACA CCGAGGTCGA GGCGCTCCAG 
CTGGAATACA ACTGGATCAA GGAATTCGAC CCCCAGTTCA ACGTCCGCTA TCGGGACGAC 
AAGACCTACC CGATGTTGGC CGTGACGCTC AACGAGGAAT ACCCACGCCT GTACGTCTAC 
CGCGGCCCGC GGCGCAAGGG CGTGCGCTAC TTCGGCCCGT ACAGCCACGC CTGGGCCATC 
CGCGAAACGC TCGATCTGTT GTTGCGGGTA TTCCCCGCCC GTACGTGCTC GGCCGGAGTG 
TTCAAGCGAC ACAACCAGAT GGGCCGGCCC TGCCTGCTGG GCTACATCGA CAAGTGCTCG 
GCGCCGTGCA TCGGGCGGGT CACCGCCGCC GAGCACCGGC AGATCGTCGA CGACTTCTGC 
GACTTCCTCG CGGGTAAGAC GGACAACCTG ATCAAGCAGC TGGAGAACGA CATGCTGGCT 
GCGTCCGAGG AACTCGACTT CGAGCGCGCC GCCCGGCTCC GTGACGACGT ATCCGCCCTC 
CGCAAGGCCG TGGAGAAGCA GGCCGTGGTG CTCGGCGACG GTACCGACGC CGACGTCATC 
GCCTTCTCCG CAGACGAGCT CGAGGCCGCG GTGCAGATCT TCCATGTCCG CGGCGGCCGG 
GTCCGCGGTC AGCGCGGCTG GGTGGTCGAG AAGCCGGGCG ACGCAGAACA GAACGAGCAC 
GCAGAGCTCG TAGAGCAGTT CCTCACGCAG TTCTACGGCG AAGAGGCCGA GCGGGCCAAG 
CAATCGGGCG ACACCGCCGC CAATCCGGTG CCGCGCGAGG TGCTCGTTCC CGTGCTGCCG 
GACGATGCCG ACGAGCTCCA GGATTGGCTC AGCGAGCTCC GCGGATCGCG GGTTTCGCTG 
CGTATTCCGC AACGCGGCGA CAAGCGCACG CTGATGGAGA CGGTGGAACG CAATGCCGCC 
GAGGCGCTGC ACCAGCACAA GCTGAAGCGA TCCGGCGACC TCACCGCGCG CTCCGCTGCA 
CTGCAAGGCC TGCAGGGCGC TCTCGATCTC GACGAGGCGC CGCTGCGCAT CGAGTGTGTG 
GACATCAGCC ACATTCAGGG CTCCGACGTC GTCGCGTCGC TGGTCGTCTT CGAAGACGGA 
CTCGCCAAGA AGTCCGACTA CCGCCACTAC GCCATCAAGG AGGCCGCGGG CGATGGTCAC 
AGCGACGACG TGGCCTCGAT CGCCGAGGTC ACCCGGCGCC GCTTCCTTCG GCACCGCGCG 
GATGCACACC AGGAGGCCGG TGACTCAGGA GCCGGCGTCG CCGCGAGTGA CAACGGGGGA 
GATCTCGCCG CGAGTGACAA CGGGGGCGAC CTCGCCCCGG AAGCCGCCAT CGACCCGCAG 
ACCGGTCGCC CCCGCCGGTT TGCGTACCCG CCGAATCTGT ACGTGGTCGA CGGTGGCCCA 
CCACAAGCCG CGGCCGCCCA AGCCGTGCTC GACGACCTCG GCGTCACGGA CGTGGCCGTG 
GTCGGACTCG CCAAGCGTCT CGAAGAGGTG TGGGTGCCCG GGGAGGACGA TCCGGTGATC 
CTGCCCCGCA GCTCCGACGC CTTGTTCCTG TTGCAGCGCG TGCGCGATGA GGCGCACCGG 
TTCGCCATCG GCTTCCACCG CACCAAGCGT TCGAAACGGA TGACCAGTAG TGCCCTCGAT 
TCCATTCCGG GACTCGGTGA TACCCGCAAA GCCGCTTTGA TCCGTCATTT CGGGTCGGTC 
GCCAAGCTCC GCGCCGCGAG CCTGGAGGAG ATCGTCGAAG TACCCGGGAT CGGGCTCACC 
ACGGCGCGCA CGGTGCTGGA CGCGCTGCGC GTCGCCGACG GCGCGTGA 

 

Protein sequence

MADPQSYRPA PGTIPTQPGV YKFRDKHGRV IYVGKAKSLR SRLNSYFADV YGLHPRTYQM 
VTTAASVEWT VVNTEVEALQ LEYNWIKEFD PQFNVRYRDD KTYPMLAVTL NEEYPRLYVY 
RGPRRKGVRY FGPYSHAWAI RETLDLLLRV FPARTCSAGV FKRHNQMGRP CLLGYIDKCS 
APCIGRVTAA EHRQIVDDFC DFLAGKTDNL IKQLENDMLA ASEELDFERA ARLRDDVSAL 
RKAVEKQAVV LGDGTDADVI AFSADELEAA VQIFHVRGGR VRGQRGWVVE KPGDAEQNEH 
AELVEQFLTQ FYGEEAERAK QSGDTAANPV PREVLVPVLP DDADELQDWL SELRGSRVSL 
RIPQRGDKRT LMETVERNAA EALHQHKLKR SGDLTARSAA LQGLQGALDL DEAPLRIECV 
DISHIQGSDV VASLVVFEDG LAKKSDYRHY AIKEAAGDGH SDDVASIAEV TRRRFLRHRA 
DAHQEAGDSG AGVAASDNGG DLAASDNGGD LAPEAAIDPQ TGRPRRFAYP PNLYVVDGGP 
PQAAAAQAVL DDLGVTDVAV VGLAKRLEEV WVPGEDDPVI LPRSSDALFL LQRVRDEAHR 
FAIGFHRTKR SKRMTSSALD SIPGLGDTRK AALIRHFGSV AKLRAASLEE IVEVPGIGLT 
TARTVLDALR VADGA