| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2542 |
|---|
| Symbol | |
|---|
| ID | 9156703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 2634996 |
|---|
| End bp | 2635982 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF199 |
|---|
| Protein accession | YP_003647484 |
|---|
| Protein GI | 296140241 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGTTGA CATCCCAGGT CAAGGATGAG CTGAGCAGGC TCTCCATCAC GCAGGTGAGT
TGCCGCCGCG CCGAGGTGGC CTCTCTGCTG CGCTTCGCGG GGGGACTGCA CATCCAGGGC
GGCAGGGTGA TCGTCGAGGC GGAGGTCGAT ATGGGCATCA TCGCTCGCCG TCTCCGCAAG
GAGATCCTCG ATCTCTACGG TTACAACTCC GATGTCCACG TGCTCAGCGC AGGTGGCCTC
CGTAAGGCGG CCCGGTACAT CGTCCGCGTG GTCAAGGACG GCGAAGCGCT CGCGCGACAG
ACGGGACTGC TCGATATGCG CGGGCGGCCG GTGGTGGGGC TGCCGTCGCA TATCGTCGGC
GGGTCCGTCG GCGATTCGGA AGCGGCGTGG CGCGGCGCCT TCCTCGCCCA CGGGTCTCTG
ACCGAACCCG GCCGCTCCAG CGCCCTCGAG GTTTCCTGTC CCGGGCCCGA GGTGGCGCTC
GCGCTCGTCG GCTGTGCTCG CCGCCTCGGC GTCACCGCGA AGGCACGCGA AGTGCGCGGC
GCCGACCGCG TGGTGGTCCG CGATGGCGAG GCCATCGGCG CGCTGCTCAC CCGGATGGGT
GCCAACGACA CCCGGTTGGT GTGGGAGGAG CGCCGGATGC GGCGCGAGGT ACGCGCCACC
GCCAACCGCC TCGCCAACTT CGATGACGCC AACCTGCGCC GCTCCGCCCG GGCCGCCGTC
GCGGCCGCCG CGCGCGTCGA GCGGGCGCTG GAGATCCTCG GTCCCGACGT CCCCGATCAC
CTCGCGCAGG CCGGTTCGCT GCGGGTGCAG CACCGTCAGG CGTCCCTGGA GGAGCTCGGT
CAGCTCGCCG ACCCGCCGAT GACCAAGGAC GCCGTGGCCG GCCGCATCCG CCGCCTGCTG
TCCATGGCCG ACAAGCGCGC CGCCGCCGAC GGTGTCCCGG ATACCGAATC CGCCGTCACC
GCGGACATGC TCGACGACGG AGAATGA
|
|---|
| Protein sequence | MALTSQVKDE LSRLSITQVS CRRAEVASLL RFAGGLHIQG GRVIVEAEVD MGIIARRLRK
EILDLYGYNS DVHVLSAGGL RKAARYIVRV VKDGEALARQ TGLLDMRGRP VVGLPSHIVG
GSVGDSEAAW RGAFLAHGSL TEPGRSSALE VSCPGPEVAL ALVGCARRLG VTAKAREVRG
ADRVVVRDGE AIGALLTRMG ANDTRLVWEE RRMRREVRAT ANRLANFDDA NLRRSARAAV
AAAARVERAL EILGPDVPDH LAQAGSLRVQ HRQASLEELG QLADPPMTKD AVAGRIRRLL
SMADKRAAAD GVPDTESAVT ADMLDDGE
|
|---|
| |