Gene Tpau_2522 details

Gene Information

• Locus tag: Tpau_2522
• ID: 9156683
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2613278
• End bp: 2615377
• Gene Length: 2100 bp
• Protein Length: 699 aa
• Translation table: 11
• GC content: 69%
• Product: transketolase
• Protein accession: YP_003647465
• Protein GI: 296140222

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCAGCA CCGCCGAGAT CCAAGCCCTC ACCACCCCGC ATCACCCCGC CGACTGGACC 
GATCTCGACA CACGTGCGGT GGACACCGCC CGAGTGCTGG CGGCCGACGC GGTGCAGAAG 
GTCGGCAACG GCCACCCGGG TACCGCCATG AGCCTCGCTC CCCTGGCCTA CACCCTCTTC 
CAGAAGGTGA TGGTGCACGA CCCGTCGGAC ACGCACTGGA TCGGCCGGGA CCGGTTCGTG 
CTCTCCTGCG GCCACTCCAG TCTCACGCTG TACCTCCAGC TCTACTTGGG CGGCTTCGGC 
CTGGAACTGA GCGACATCGA GGCATTGCGC ACCGAAGGGT CCCTGACCCC GGGCCATCCC 
GAGTACGGGC ACACCAAGGG CGTCGAGATC ACCACCGGTC CGCTCGGCCA GGGCCTGGCC 
TCCGCCGTCG GCATGGCGAT GGCCTCGCGG TACGAGCGCG GCCTGTTCGA CCCGGAGACC 
GCGCCGGGAC AGAGTCCGTT CGACCACTTC ATCTACGTGA TCGCCTCCGA CGGCGACATC 
GAAGAGGGCG TCACCTCCGA GGCCAGTTCC CTCGCCGGTA CCCAGCAGCT GGGCAACCTG 
ATCCTGTTCT ACGACGACAA CAAGATCTCC ATCGAACACA ACACCGACAT CGCGCTGTCG 
GAAGACGTCG CGAAGCGCTA CGAGGCGTAC GGCTGGCACG TGCAGTACGT CGAGGGCGGC 
GAGAACGTCA CCGCGATCGA GGAGGCCACC GCGGCCGCCA AGGCCGTCAC CGACAAGCCC 
TCGATCATCA TCGTGCGCAC CATCATCGGC TTCCCCGCCC CGAACAAGAT GAACACGGGC 
GGCGTGCACG GCTCGGCGCT CGGCGCCGAC GAAGTGGCCG CGGTGAAGGA GATCCTCGGC 
TTCGACCCGG CGAAGAGCTT CGACGTGGAC CCCGAGGTCA TCGCGCACTC CCGTGAGTTG 
GTCAAGCGCG GCCAGGCCGA GCACGAGGCG TGGAACGCGA AGTTCGACGC CTGGGCCTCC 
GCCAACCCGG AGCGCAAGGC GCTGCTCGAC CGGCTCGAGG CCGGCACGCT CCCCGAGGGC 
TGGGACGCCG AACTCCCCAC GTGGGGCGTC GACGACAAGG CCATCGCGAC CCGCGCCGCA 
TCGGGCGCCT TCCTCGCGGC AGCCGGCCAG ACCCTGCCCG AGCTGTGGGG CGGCTCCGCC 
GACCTCGCCG GGTCGAACAA CACCACGATC AAGGGCGCCG ACTCCTTCGG CCCGCCGTCG 
ATCTCGACCG ACGACTGGAA CGCGCAGCCC TACGGCCGCA CCCTGCACTT CGGCATCCGC 
GAGCACGCCA TGGGCTCGAT CCTCAACGGC ATCGTGTTGC ACGGACCCAC CCGTCCGTAC 
GGGGGCACGT TCTTGCAGTT CGCCGACTAC ATGCGTCCCG CGGTTCGCCT CGCCGCTCTC 
ATGGACATCG ATCCGATCTA CGTGTGGACG CACGACTCGG TCGGTCTCGG TGAGGACGGT 
CCGACGCACC AGCCGGTCGA ACACCTCGCT GCACTGCGCG CCATCCCGGG CTTGAACGTG 
GTGCGTCCGG CCGATGCGAA CGAGACCGTC GCCGCGTGGA AGGCCACTCT CGAGCGCACC 
GGCGGAAACG GCCCCACCGG CCTGATCCTC ACCCGCCAGG GCGTGCCGAT CCTGCCCGGC 
ACCTCCGCCG AGGGCGTCGC CCGCGGCGCT TACGTCCTCA AGGAAGCCGA TGGCGGCACG 
CCGGACGTGA TCATCATCGG CACCGGGTCC GAGGTGCAGC TGGCCCTCCA GGGCGCGGAG 
CTGCTCGCCG CGAAGGGCAT CAAGGCGCGC GTCGTCTCGA TGCCCTCGGT GGAGTGGTTC 
CACGCCCAGG ACCAGGCCTA CCAGGACAGT GTGCTGCCTC CGTCGGTCAA GGCGCGGGTC 
GCGGTCGAGG CGGGCATTGC ACAGTCGTGG TGGCGCATCG TCGGCGGTTT CGGCGAGGTG 
CTCTCGCTGG AGCACTTCGG CGAGTCCGCC TCGGACAAGG TCCTGTTCGC TAAGTACGGA 
TTCACCGGCG AGAACGTGGC CCAGAAGGCC GAGCAGTCCC TCGCCAACCT GAAGGGATAG 

 

Protein sequence

MTSTAEIQAL TTPHHPADWT DLDTRAVDTA RVLAADAVQK VGNGHPGTAM SLAPLAYTLF 
QKVMVHDPSD THWIGRDRFV LSCGHSSLTL YLQLYLGGFG LELSDIEALR TEGSLTPGHP 
EYGHTKGVEI TTGPLGQGLA SAVGMAMASR YERGLFDPET APGQSPFDHF IYVIASDGDI 
EEGVTSEASS LAGTQQLGNL ILFYDDNKIS IEHNTDIALS EDVAKRYEAY GWHVQYVEGG 
ENVTAIEEAT AAAKAVTDKP SIIIVRTIIG FPAPNKMNTG GVHGSALGAD EVAAVKEILG 
FDPAKSFDVD PEVIAHSREL VKRGQAEHEA WNAKFDAWAS ANPERKALLD RLEAGTLPEG 
WDAELPTWGV DDKAIATRAA SGAFLAAAGQ TLPELWGGSA DLAGSNNTTI KGADSFGPPS 
ISTDDWNAQP YGRTLHFGIR EHAMGSILNG IVLHGPTRPY GGTFLQFADY MRPAVRLAAL 
MDIDPIYVWT HDSVGLGEDG PTHQPVEHLA ALRAIPGLNV VRPADANETV AAWKATLERT 
GGNGPTGLIL TRQGVPILPG TSAEGVARGA YVLKEADGGT PDVIIIGTGS EVQLALQGAE 
LLAAKGIKAR VVSMPSVEWF HAQDQAYQDS VLPPSVKARV AVEAGIAQSW WRIVGGFGEV 
LSLEHFGESA SDKVLFAKYG FTGENVAQKA EQSLANLKG