Gene Tpau_2518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2518 
Symbol 
ID9156679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp2609813 
End bp2610388 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003647461 
Protein GI296140218 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0208752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACGA CGAGCACGTA TCACCACGGC GACCTTCCCG GCGCCCTCGT CACCGCCGCC 
GTCGAGCTGC TCGACGAGGA GGGCGGGGCC GGCGATCTGT CGCTGCGCGC CGTGGCCCGG 
CGGGCCGGGG TGTCGACCGC CGCGCCGTAC CGCCATTTTC CCGACCGGAA CGCATTGATC 
TCCGCCGTCG CGGCGGTCGG CTACCGTGAG CTGGCCGCCA CGCTGGCGGA GGCGAGCCCG 
GCGCCGTCAT CGCCAGACGA CCTTGCCGAC ATCGGCGTGG CCTACGTGAA CTTCGCGCTG 
CACCGCACGG GTCTGTTCCG GGCCATGTTC GCCGAGCCCT GCGGCACCGA CCCGGATCGC 
GTCGAAGCGG TCGACGCGAT CACCGCGTAC CTCCATCACA TCGTCGCCCA AGCATTGCCG 
TCCGAGGACG TGGACGCGAC GGCCACCGCT GTGTGGGCGC TGGTGCACGG ACTCGCCTTC 
CTGCACCTCG ACGGCAAACT CGACTCCTCA TCTCCTGCGG AGGTCGACCG CCGCGTCCGG 
TCGACGGTGC GCGCCGCCCT CGTCCCCCGT GGCTGA
 
Protein sequence
MTTTSTYHHG DLPGALVTAA VELLDEEGGA GDLSLRAVAR RAGVSTAAPY RHFPDRNALI 
SAVAAVGYRE LAATLAEASP APSSPDDLAD IGVAYVNFAL HRTGLFRAMF AEPCGTDPDR 
VEAVDAITAY LHHIVAQALP SEDVDATATA VWALVHGLAF LHLDGKLDSS SPAEVDRRVR 
STVRAALVPR G