Gene Tpau_2503 details

Gene Information

• Locus tag: Tpau_2503
• ID: 9156664
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2596172
• End bp: 2596873
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 67%
• Product: ThiJ/PfpI domain protein
• Protein accession: YP_003647446
• Protein GI: 296140203

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGTCG CCATCGTCGT CTACCCGGAC TTCACCGCGC TCGACTTCAT CGGCCCCTAC 
GAAGTGCTCC GGATGGTGCC GGGGAACGAA GTCCGGTTCG TATGGAAGGA GACCGGCCCG 
ATCACCGCGG ACTCCGGCGT TCTACTCGTG GGAGCGACGC ACACCTTCGA CGAGACGACT 
TCACCCGACA TCGTGCTCGT TCCGGGTGGC CCTGGGTCAA GCGCGGCCGC GCTCGACGAT 
GACATGCTCA CCTGGCTGCG AAAGGTTTCT CCCGGGGCGA CCTGGACCAC GTCGGTGTGC 
ACCGGCTCCC TCGTGCTAGC GGCCGCCGGA CTCCTCGCAG GCAAACGGGC CACCACCCAC 
TGGACAATGC TGCCCGCACT CCGCACCTAC GACGTAACGC CAGTAAGCGA CCAGCGCATC 
GTGCACGAGG GCGATATCGC GACAGCGGCG GGCGTCTCGG CTGGGATCGA TCTCGCGCTG 
TGGCTCGTCG GCCAGACCGA CGGAGCAGCC AAAGCCGAGG CGGTGCAATT GATGATCGAG 
TACGACCCGC AGCCGCCCTT CGATTCCGGG CATACCAGCA AGGCGTCGCC GGCGACCAAG 
GCGCGTGCCG TGGCACTACT GGGCGCGGAC GTGCTCAAGC CTGCGCCACT CAAGGCGGCC 
GCCCGGCTGC TGTGGAACCG GGCGATCGCT GCGGTCCGCT AG 

 

Protein sequence

MQVAIVVYPD FTALDFIGPY EVLRMVPGNE VRFVWKETGP ITADSGVLLV GATHTFDETT 
SPDIVLVPGG PGSSAAALDD DMLTWLRKVS PGATWTTSVC TGSLVLAAAG LLAGKRATTH 
WTMLPALRTY DVTPVSDQRI VHEGDIATAA GVSAGIDLAL WLVGQTDGAA KAEAVQLMIE 
YDPQPPFDSG HTSKASPATK ARAVALLGAD VLKPAPLKAA ARLLWNRAIA AVR