Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2486 |
Symbol | |
ID | 9156647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 2578748 |
End bp | 2579470 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | Rhomboid family protein |
Protein accession | YP_003647429 |
Protein GI | 296140186 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.19288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCACCG TTTCGACCAG CCGCAGCTGG CAGCCCGTGC TGACCTATTC GCTGATCGCC GTCAACGTGA TCGCCTTCGC GTTCAGCGCG AAGGCCTCCG GCAGCATTCA GTACAACATG TCGGCCCCGG AGGTGAAAGA GTTGGCGCTC TCCGAGGTGG CCACCGCCAA CGGGTGGTGG TGGACCGCCA TCACCTCGGG ATTCCTGCAC TTCGGTCCCA TTCACCTGCT GGTGAACATG TACTCGCTGT ATGTGCTGGG CCGCAATGTC GAGCAGGTGA TGGATCGGGC GCACTACGGG GCGATCTACG CGATCTCGCT GCTCGGTGGT AGTGCTTCGG TGCTGTGGTT CGGCCTGGAG AACACCATCA CGGTGGGTGC GTCGGGCGCG ATCTTCGGCC TGATGGGCGC GGAACTGGTG CTGCTCTTGC GGATGAAGAT GAACCCCACG TCGCTGGTGG TGGTGATCGG TGCGAACGTG ATCGCATCGA TGATGATCCC GGGCATCTCG CTCATGGGCC ACCTGGGCGG TCTCGTCGCG GGTGCGGCGG TCGCCGCCGC GATGGTCTAC GTGCCCGAGC TGTTGCCACG GGACAAGCGC ACCGCCAAGC AGATCCAGGC CGTCGGCTGG GCGTGCACCG GCGTGATCGC CGCGGTCGTG GTGGCGCTCA TCGCGGTACG GTTCGGCACC TACCCGGCGG TGAACCGTTT CGTGATCGGC TGA
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Protein sequence | MTTVSTSRSW QPVLTYSLIA VNVIAFAFSA KASGSIQYNM SAPEVKELAL SEVATANGWW WTAITSGFLH FGPIHLLVNM YSLYVLGRNV EQVMDRAHYG AIYAISLLGG SASVLWFGLE NTITVGASGA IFGLMGAELV LLLRMKMNPT SLVVVIGANV IASMMIPGIS LMGHLGGLVA GAAVAAAMVY VPELLPRDKR TAKQIQAVGW ACTGVIAAVV VALIAVRFGT YPAVNRFVIG
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