Gene Tpau_2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2470 
Symbol 
ID9156630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2565302 
End bp2566615 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content67% 
IMG OID 
Productprotein of unknown function DUF222 
Protein accessionYP_003647414 
Protein GI296140171 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAGG CGGTGTGCAC GTCAGCGCAG TATCTGGATG CGCTCGCCGC CTTCGAACAC 
GCCACTGAAA TCCTGGCCTC CGCGGACCCG GTGCTGTTGT CCTCGCCGGA GGTGTTAGCT
TCGCTGTCAC GGCTGGAAGT TGCGGTGCGG AGAGTGCCGG TGGCGCAGCA CGCGCTGGTG
CAGGTCGCGC ACGAGCAGGG CCTGCCCGGC ACCCTCGGCT ACACCGGCCT CAAGGAAATG
TTGATCGATC GGTTGCGGCT CGCCGGCACC GAAGCCCGCG ACCGGGTTGC CGGTGCGCGA
GGCCGAGCGA TCGAGCACCT GCCCTGTGGT GTTGCGCAGC CGCGGTTCGC GTTGACGATG
GCGGCGCAAC GGCAGGGGGC GATCAGTGAA CGGCACGCCC TGACGATCGA GCAGGTGTTC
CGCACCTGCC CACCCAGCGT GGACAAGCCC GACGTGTTGG AAGACATTCT GGTGACGGCG
GCGCGGGAGG CCACCCCCAA ACACGTAGCC AAGGTCGGCC GGCGGGCGAT CGAGCTGCTC
GACCCCGATG GAGTGGAGCC GAACCCGGAG AAAGCACGCC GCGCCCGCGG ACTGGAAATC
GGGCGCCAGG ATAAGAATCT GATCTCGGAC TTCGGCGGCA CCCTCTCCGC CGAATGCCGG
GCACTGATGG AAGCGGTATT CGCGAAATAC GCCCGCCCCG GGATGAACAA CCCGGACGAC
CCCGACAGCC CGGCTGAGGG CGCCACCGCC GAGGAACTCT CGGAGGCGGC GCAGCGTGAT
CACCGCAGCC TCGCCCAACG CCAACACGAC GCATTGACGC ACGCCCTGCG ACTCGCGGTC
TCGTCCGGCG AACTCGGCCA ACACCGCGGA CTGCCATGCG TTCCGATCAT CACCATGAGC
ATCGACCAAC TCGAATCCGA AACCGGGATC GCGACCACCA CCACCGGCGG ACGACTCTCC
ATCACCGACG CCATCCGCAT GGCCGGCACC AACCCGAAAT ACTTCCTCCT CCTCGACCTC
CACCAACGAC CCCTGTACCT CGGTCGAGAG AAGCGTCTCG CCACCGCCGA TCAGCGAATC
GCGCTCTACG GCAGCGAACA CGGCTGCACC GCACCCGGCT GCGATGCCCC CGCCACCCGC
ACCCAGGTCC ATCACGTCAC CGAATGGCAG AACGGAGGCC GCACCGACAT CACCAGCCTC
ACCCTCGCCT GCGATGCCCA CCACGCCAAA GTCAATCCCA CGGGCCTTAC CCCCTGTTCT
TGGGAGTGTC AGATTTTCGG TGTAAGTGGC GTTGTTAGCC CTGGTCTCGG TTGA
 
Protein sequence
MTEAVCTSAQ YLDALAAFEH ATEILASADP VLLSSPEVLA SLSRLEVAVR RVPVAQHALV 
QVAHEQGLPG TLGYTGLKEM LIDRLRLAGT EARDRVAGAR GRAIEHLPCG VAQPRFALTM
AAQRQGAISE RHALTIEQVF RTCPPSVDKP DVLEDILVTA AREATPKHVA KVGRRAIELL
DPDGVEPNPE KARRARGLEI GRQDKNLISD FGGTLSAECR ALMEAVFAKY ARPGMNNPDD
PDSPAEGATA EELSEAAQRD HRSLAQRQHD ALTHALRLAV SSGELGQHRG LPCVPIITMS
IDQLESETGI ATTTTGGRLS ITDAIRMAGT NPKYFLLLDL HQRPLYLGRE KRLATADQRI
ALYGSEHGCT APGCDAPATR TQVHHVTEWQ NGGRTDITSL TLACDAHHAK VNPTGLTPCS
WECQIFGVSG VVSPGLG