Gene Tpau_2453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2453 
Symbol 
ID9156613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp2551833 
End bp2552504 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003647397 
Protein GI296140154 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.106386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGGAGA CCGCCCTCAC CCGGGACGCG ATCGTCGCCG AGGCCGTGCG CCTCGCCGAC 
GAGGGCGGGC TGGAGAAGGT CTCGATGCGG CGCATCGCCG AGGCGCTCGG TACCGGTGCC 
ATGTCGCTCT ACCGGCACGT ACCCGATAAG GAAACGCTGA TCCGCGAGAT GGCCTCCGCG 
GTGGGCACCG GTGCGCTGTA TCCCGAAGAG TTGCTGGGAG ATCCCGACTG GCGCCATCGC 
GTGCACCTCG CCGCCGAGAT CGATCTGAGG CTCTACCTCC GGCACCCGTG GGTGCTCCTC 
GCGCACGCCA TGCCGCGAGC CGCGATCTCG CCGTCGTCGG TGGCCTGTTT CGATTGGCTC 
GTCGAGGCCC TCGATCACCT CACCGGCAGG GTGGACGATT CCGCGGAACT CGCCCTCCAC 
GTGTGGAACC ACGTCCAGGG TGCCGGACTG GGTGCCGTGG GCCGGGTGCT CGTCGCCCCC 
GGATCCTCGC TCGACGGTGT GGGGTTCGTC GCGGGCCTCG CCGACGACCC GCTCATCGAC 
GATCTCCCGC GGATGAGTGA ACTCGTGGCC ATCGAGCGGC CGGAGTTGTG CCAGGCCATG 
CCGTTGTTGC GGTCCGGCAT CGAGGCACTG TGCGACGGCT TCGCCGCCCG CTACGGCGAC 
CGCCGCGAGT GA
 
Protein sequence
MSETALTRDA IVAEAVRLAD EGGLEKVSMR RIAEALGTGA MSLYRHVPDK ETLIREMASA 
VGTGALYPEE LLGDPDWRHR VHLAAEIDLR LYLRHPWVLL AHAMPRAAIS PSSVACFDWL 
VEALDHLTGR VDDSAELALH VWNHVQGAGL GAVGRVLVAP GSSLDGVGFV AGLADDPLID 
DLPRMSELVA IERPELCQAM PLLRSGIEAL CDGFAARYGD RRE