Gene Tpau_2448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2448 
Symbol 
ID9156608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2546612 
End bp2547754 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003647392 
Protein GI296140149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGATCT TCGACAAGGT CCGGGGCGAA CTCGTCGACA TCATCGAGTG GCTCGAGGAC 
GATCGCTCGG TCATGGCGTG GCGGTTTCCG CGCTACAACA ACGAGATCAA GAACGGTGCA
CAGCTCATCG TCCGCGAGGG CCAGGAGGCG CTGTTCGTCT ACCGCGGCCA GCTCGCCGAC
CGGTACGGCC CCGGCGGCTA CACCCTGGTT TCGGAGAACA TGCCGGTCAT GTCCACGCTG
CAGGGCTGGC CGCATGGTTT TTCGAGCCCG TTCCGCAGCG AGGTCTACTT CGTCAACCGT
CGGCCGATCA CCGATCTGCG GTGGGGCACC CCCAATCCGG TCACCATCCG GGATCCTGAT
TTCGGCATGG TCCAGGTGCG CGCCAATGGT CTCTGCGTGG TCCGGGTGAT CGATTCGCCC
ACCTTCCTAC GACAGGTGAT CGGTACCGAC TCCAATGTCG ACTCGGACGA GATCGCCGAA
CTGCTGCGCC GCACCATCGC CACCGCATTC TCCGACATGT TGATGGAGAC CGGTGTCGGC
GCGATCGAAC TGCAGGGCCG CCAGCGCGAG CTCTCGGAGA AGCTGCGCGA GTACGTGCAG
ACCCGGATCC AGGGACCGTA CGGCCTCGCC TGTGAGGCGA TCGAGATGAA CATCTCGCTG
CCCGACGAGA TCACCCAGGC GATGACGCGT GGCGTCGCCC GTGGTGTCGA GGAGAAGGGG
TACTACGGCA ACGTCGGCGA TATGAACCGA TTCCAGCAGG GCCGGGCAGC CGACTCGATG
CTGGGCGCCG CGACGAACCC CGGCGGGGGC GCCGCGGGCG ACTTCATGTC GGCCGGTATG
GGCATGGCGA TGGGGCAGCA GTTCAGCCAG AGTTTCCAGA ACCAGCAGAA CGCCGCCCCG
AACCCGGCGG GACAGTCGGC GCCCCCTCCG CTCCCCGGTG GCGGTCAGCA GTTCCATGTC
GAGCAGAACG GCCACGCAGT CGGACCGCTG CCCATCGAGG AGTTGCGTGG CACGAACCTC
ACGCCGCAGA CGCTGGTGTG GTCCGCCGAT ATGACGGGGT GGACGCCGGC GGGTGAGGTT
GCGGCGCTGC GGAGCCTGTT CGGTCAGACC CCTCCGCCGC TGCCGCCCCA GCCGAGCCGA
TGA
 
Protein sequence
MGIFDKVRGE LVDIIEWLED DRSVMAWRFP RYNNEIKNGA QLIVREGQEA LFVYRGQLAD 
RYGPGGYTLV SENMPVMSTL QGWPHGFSSP FRSEVYFVNR RPITDLRWGT PNPVTIRDPD
FGMVQVRANG LCVVRVIDSP TFLRQVIGTD SNVDSDEIAE LLRRTIATAF SDMLMETGVG
AIELQGRQRE LSEKLREYVQ TRIQGPYGLA CEAIEMNISL PDEITQAMTR GVARGVEEKG
YYGNVGDMNR FQQGRAADSM LGAATNPGGG AAGDFMSAGM GMAMGQQFSQ SFQNQQNAAP
NPAGQSAPPP LPGGGQQFHV EQNGHAVGPL PIEELRGTNL TPQTLVWSAD MTGWTPAGEV
AALRSLFGQT PPPLPPQPSR