Gene Tpau_2415 details

Gene Information

• Locus tag: Tpau_2415
• ID: 9156575
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 2512676
• End bp: 2513473
• Gene Length: 798 bp
• Protein Length: 265 aa
• Translation table: 11
• GC content: 72%
• Product: tRNA/rRNA methyltransferase (SpoU)
• Protein accession: YP_003647360
• Protein GI: 296140117

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACGCACC CCACGGAACG ACCCGCGGAC CCGCTCTTCA CCGAGCGCAC CCCGCGGGTC 
GTTTCCGCAT CCAAGCTCCT GCGTGCCGCC GGTCGCCGCA AAGCCGGGTT GTTCCTGGCC 
GAGGGCTCCA ATGCCGTCAC CTCCGCGCTC GCAGCGGGTC TCGTGGATGA GATCTTCGTG 
ACGGAGGACG GCGCAGCGCG CTATCCCGAC TTGCTCACCG GCCGGGTCGC GTACGTCACC 
GACCGGGCGA TGCGCGGGCT CTCCGACACC GTCACCCCGC CCGGGATCGT CGCGGTCTGC 
CGGGCGCTCC CCGAGGGTCG CGTGCCCGAC GGTGCACGGC TGGTCGCGGT CCCCGTCGAC 
GTGGCCGAAC CGGGCAACGC CGGCACCGTC ATCCGAGTCG CGGATGCGGT CGGCGCCGAC 
GCCGTCCTGC TCGCGGGTGA CGCCGTCGAT CCGATGAACG GGAAGGTGGT GCGCGCCTCC 
GCGGGGTCTG TCTTCCATCT TCCTGTCGTG CAGGAGCGCG ACGCGTCCGC GGCGATCGCG 
CAGCTCAAGG AATCGGGCCT GACGGTGCTC GCCACCGCCG CCGACGGCGA GGTCTCGCTC 
GACGACGCCG ACGAGATGCT CGCCGCGCCG ACCGCCTGGC TGTTCGGCAA CGAGGCGCAT 
GGACTCCCGC GCGGACTGCA GGCCGCCGCA GACCACCGCA TCGCCATCCC GATCCGGGGC 
CGCGCCGAAT CGCTCAACCT CGCCACCGCC GCGTCGATCT GCCTGTACGC GAGCTCACGA 
GTGCATCACC GCGGCTGA 

 

Protein sequence

MTHPTERPAD PLFTERTPRV VSASKLLRAA GRRKAGLFLA EGSNAVTSAL AAGLVDEIFV 
TEDGAARYPD LLTGRVAYVT DRAMRGLSDT VTPPGIVAVC RALPEGRVPD GARLVAVPVD 
VAEPGNAGTV IRVADAVGAD AVLLAGDAVD PMNGKVVRAS AGSVFHLPVV QERDASAAIA 
QLKESGLTVL ATAADGEVSL DDADEMLAAP TAWLFGNEAH GLPRGLQAAA DHRIAIPIRG 
RAESLNLATA ASICLYASSR VHHRG