| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2360 |
|---|
| Symbol | |
|---|
| ID | 9156516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 2452364 |
|---|
| End bp | 2453191 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | Protein of unknown function DUF998 |
|---|
| Protein accession | YP_003647305 |
|---|
| Protein GI | 296140062 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.573198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTGCT GCGCATCGCC TGATACACAG TGTTTTGTGC CGTTAACGAT CTCGCGCCTC
CCGTCGCTAC GACCGCATAC GGAGGTCGGC CGTCGACGCA CCGTGCTCGC GGGTGCCCTG
CTCGCCGCGT CAGTGCTGTA CTTCCTTGCC GAACTGGTGG TCGCGGCGCG CTGGCCGCAG
CCGTATAGCT GGACCCAGAA CATGATCAGC GATCTCGGTG TGCCCGAATG CCTCGGGGAC
ATGAGCAGAT TCGGCGATAT GGCCGTGGCG GACCGGTACA TCTGCTCGCC CTGGTACCCG
CTGATGAACG CGGCGTTCGT CGTGGTCGGA GCTCTGGGTG TTGCGGCGGC GGTCGCGCTG
CTCCCCCGGA TACCTCGGCC TTGGGACCGG ATAGTGCTCG TCCTCGCGAC CGTGAATGGC
ATCGCCCTCG CCTGCGTGGG CTTGTTCCCA GGTAGCGCAG GGGAATTCCC TGGTGGCTCT
CGGGTGCGCA TCGTGGTACA CCCGATCGCC GCCTACCTCG AGCACGTAAC CGGCATGGCG
CTGATGGCGA TCGCCGTCAT GTTGCTCCTG CGTCGTCGGC GCAGCCTCGC CGGAGTAACC
GCTGTGCTCT TCGCGGTCTC GGGCCTCGCC GCCCTCGTGA TCCTCTGGGG CAATCCGATC
GGGCCGGGCG GCACGGAGCG CGCTGCGATC GATCCGTTCC TATGGTGGCG GGTGTTCGTC
GGCGCCGCCC TCCTGCTGGT CGCCTTCCGG TACGACGGCA CTCCCGGACG CGGACGAGAG
GTGCGAGAAA AGCGATCGCG GGCCCTCCAG GAGGGCCCGC GATCGTGA
|
|---|
| Protein sequence | MRCCASPDTQ CFVPLTISRL PSLRPHTEVG RRRTVLAGAL LAASVLYFLA ELVVAARWPQ
PYSWTQNMIS DLGVPECLGD MSRFGDMAVA DRYICSPWYP LMNAAFVVVG ALGVAAAVAL
LPRIPRPWDR IVLVLATVNG IALACVGLFP GSAGEFPGGS RVRIVVHPIA AYLEHVTGMA
LMAIAVMLLL RRRRSLAGVT AVLFAVSGLA ALVILWGNPI GPGGTERAAI DPFLWWRVFV
GAALLLVAFR YDGTPGRGRE VREKRSRALQ EGPRS
|
|---|
| |