Gene Tpau_2357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2357 
Symbol 
ID9156513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp2450347 
End bp2451003 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003647302 
Protein GI296140059 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGAGC GACAGCGGGT CCCGTTGACG CGTGATCGGG TCGTGGCGGC CGGGGTCGCG 
CTGGCCGATG CGTCCGGTCT GGCCGCCGTC ACGATGCGGG CGGTCGCCGG CTCGCTGGGA 
GTGGAGGCGA TGTCGCTGTA CAACCACGTG GCCAACCGTG CGGACCTGCT CGACGGCATG 
ATCGACGCTG TCTTCGGTGA GATCGGCCTC CCTGTGGAGG GCGACCAGTG GCGCTCCGGA 
TTGCGTGCCT TAGCCGGGTC CACGCGCGAC GCGCTGCGTC GCCATCCCTG GGCGATCGGA 
CTGATGGACT CTCGACAGAA CCCGGGGCCC GCCACGCTGC GGCATCACGA CACGGCCCTG 
GGGTTGTTGC GGCGAGCCGG ATTCGGGGTC CGTGAAGCGG TGCGTGCGGT GGCTGTCCTG 
GACGGCTACG TCTACGGCAG TGTGCTCACC GAGCGGAGTC TGCCGGTCGG TGATGACCGG 
TCCCTCCGGG ACGCGGCGGA GGAGGCGGTG TCCGCCATCT CCGCCGCCGA CTATCCCTAC 
CTCGTCGAGG TTGCGTCCGA CCATGCGCGC ACCGGGTTCG ACGATCCCGG CTTCGATGCG 
GAGTTCACGT TCGGCCTCGA CCTGATCGTC GCGGGGCTCG AACCCGGCGC AGGCTAG
 
Protein sequence
MTERQRVPLT RDRVVAAGVA LADASGLAAV TMRAVAGSLG VEAMSLYNHV ANRADLLDGM 
IDAVFGEIGL PVEGDQWRSG LRALAGSTRD ALRRHPWAIG LMDSRQNPGP ATLRHHDTAL 
GLLRRAGFGV REAVRAVAVL DGYVYGSVLT ERSLPVGDDR SLRDAAEEAV SAISAADYPY 
LVEVASDHAR TGFDDPGFDA EFTFGLDLIV AGLEPGAG