Gene Tpau_2328 details

Gene Information

• Locus tag: Tpau_2328
• ID: 9156484
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2421677
• End bp: 2423863
• Gene Length: 2187 bp
• Protein Length: 728 aa
• Translation table: 11
• GC content: 67%
• Product: malate synthase G
• Protein accession: YP_003647274
• Protein GI: 296140031

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0677187
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGATA CCGCCCGCAC GTCCGTCGCC GGTCTCGATG TCGCGACGGT TCTCTACGAC 
TTCATCAACA ACGAGGCCCT TCCGGGCACG GGCGTAGACC AGGCCGCCTT CTGGACCGGT 
GCGGCGAAGC TGATCGGCGA CCTCGTTCCG AAGAACAAGG CACTGCTCGC CAAGCGCGAC 
GAGTTGCAGG CGAAGATCGA CGACTTCCAC GCGGCGGCCC CGGGACCCGT GGACTTCCCC 
GCCTACAAGC AGTTCCTCAC CGACATCGGC TACCTCGTGC CCGCCACCGA GGACCGTGAG 
ATCACCACCG ACAAGGTCGA CACCGAGATC ACCTCGACCG CGGGCCCACA GCTGGTCGTG 
CCGATCCTCA ACGCCCGCTT CGCGATCAAC GCCTCGAATG CGCGCTGGGG CTCGCTCTAC 
GACGCGCTCT ACGGCACCGA TGCCATCTCC GAGGCCGACG GCGCGGAGAA GGGCACGAGC 
TACAACAAGG TCCGCGGTGA CAAGGTGATC GCCTTCGCCA AGGACTTCCT GGATCAGGCC 
GTGCCGCTCG AGTCGGGCTC GCACGCGGAT GTCACCGAGT ACCGCATCAA CGGCACCGAG 
CTGCTCGCGA CCGTCGCCGG GGCGTCGGGC GCCAGCGAGG ACGCTTCGGT CGGCCTCGCC 
GACCCGTCGG CCTTCGTCGG CTACACCGGT GAGCGCGCCG CGCCGACCGG CATCCTGCTG 
CGTCACAACG GCCTGCACCT GGAGATCCAG ATCGATCCGG CGTCCCCGAT CGGCTCCACC 
GATCGCGCGG GCGTCAAGGA CGTGCTCGTC GAGTCCGCGG TCACCACGAT CATGGACTTC 
GAGGACTCGG TCGCGGCCGT CGACGCCGAC GACAAGGTCG TGGGCTACCG GAACTGGCTG 
GGCCTGAACA AGGGCGACCT GGCCGAAGAG GTCACCAAGG GCGGCAAGAC CTTCACCCGC 
ACGCTGAACC CGGACCGGGT CTACACCGCG ACCGACGGCT CGGAGCTGGT TCTGCACGGC 
CGCTCGCTGC TGTTCGTGCG CAATGTGGGC CACCTGATGA CCACGGACGC GATCCTGCTG 
GACGGCGAAG AGATCGGCGA GGGCATCCTC GACGGCATCG TCACCTCGCT GATCGCGATC 
CACGGACTGT CGGGCGAGGT CAAGAACTCG CGCACCGGCT CGATCTACAT CGTCAAGCCC 
AAGATGCACG GCCCCGAGGA GGTGGCGTTC GCCGCCGAGA TCTTCGAACG CGTCGAGCAG 
ATCCTGGGCC TGCCCGCCCT CACCCTGAAG ATGGGCATCA TGGATGAGGA GCGCCGCACC 
TCGGTGAACC TCAAGGCCGC GATCGCCGCC GCGAACGATC GCGTGGTGTT CATCAACACC 
GGCTTCCTCG ATCGCACCGG CGACGAGATC CACACCTCGA TGGTCGCCGG ACCGATCGTC 
CGCAAGGGCG AGCTCAAGGC ACAGACCTGG TACCCCGCCT ACGAGGACTC CAACGTCGAC 
ATCGGCCTGC ACGCCGGACT GCAGCACAAG GCGCAGATCG GTAAGGGCAT GTGGGCCATG 
CCCGACCTGA TGGCCGCGAT GCTGGAGCAG AAGATCGCCC AGCCCAAGGC CGGCGCTACG 
ACCGCATGGG TTCCTTCGCC CACGGCCGCG ACGCTGCACG CGCTGCACTA CCACCTGGTG 
GACGTGTTCG AGACCCAGAA CGAGATCGCC AAGCGGGATC CGGCTTCGGT CGACGACATC 
CTCACCATCC CCTTGGCTCC GAAGACCGAT TGGTCCGACG CCGAGAAGCG CGAGGAGCTC 
GACAACAACA GCCAGTCGAT CCTCGGTTAC GTGGTGCGGT GGATCGACCA GGGCGTGGGT 
TGCTCGAAGG TGCCCGACAT CCACGACGTC GCGCTCATGG AGGATCGCGC CACGCTGCGC 
ATCAGCTCGC AGCTGCTGGC GAACTGGCTG CGGCACGGCA TCGTGACCGA GGATGAGATC 
GTGGAGTCGC TCAAGCGGAT GGCGCCGGTG GTCGACCAGC AGAACGCGGG CGACCCCGAG 
TACCGGCCGC TGGCACCCGA TTTCGACTCG AACATCGCCT TCCAGGCCGC GAAGGACCTG 
ATCCTGCTGG GCGGCGAGCA GCCGAGCGGC TACACCGAGC CGATCCTGCA TGCGCGTCGG 
CGCGAGTTCA AGGCCGCGAA CAGCTGA 

 

Protein sequence

MADTARTSVA GLDVATVLYD FINNEALPGT GVDQAAFWTG AAKLIGDLVP KNKALLAKRD 
ELQAKIDDFH AAAPGPVDFP AYKQFLTDIG YLVPATEDRE ITTDKVDTEI TSTAGPQLVV 
PILNARFAIN ASNARWGSLY DALYGTDAIS EADGAEKGTS YNKVRGDKVI AFAKDFLDQA 
VPLESGSHAD VTEYRINGTE LLATVAGASG ASEDASVGLA DPSAFVGYTG ERAAPTGILL 
RHNGLHLEIQ IDPASPIGST DRAGVKDVLV ESAVTTIMDF EDSVAAVDAD DKVVGYRNWL 
GLNKGDLAEE VTKGGKTFTR TLNPDRVYTA TDGSELVLHG RSLLFVRNVG HLMTTDAILL 
DGEEIGEGIL DGIVTSLIAI HGLSGEVKNS RTGSIYIVKP KMHGPEEVAF AAEIFERVEQ 
ILGLPALTLK MGIMDEERRT SVNLKAAIAA ANDRVVFINT GFLDRTGDEI HTSMVAGPIV 
RKGELKAQTW YPAYEDSNVD IGLHAGLQHK AQIGKGMWAM PDLMAAMLEQ KIAQPKAGAT 
TAWVPSPTAA TLHALHYHLV DVFETQNEIA KRDPASVDDI LTIPLAPKTD WSDAEKREEL 
DNNSQSILGY VVRWIDQGVG CSKVPDIHDV ALMEDRATLR ISSQLLANWL RHGIVTEDEI 
VESLKRMAPV VDQQNAGDPE YRPLAPDFDS NIAFQAAKDL ILLGGEQPSG YTEPILHARR 
REFKAANS