| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2295 |
|---|
| Symbol | |
|---|
| ID | 9156451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 2386341 |
|---|
| End bp | 2389673 |
|---|
| Gene Length | 3333 bp |
|---|
| Protein Length | 1110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | Exodeoxyribonuclease V |
|---|
| Protein accession | YP_003647241 |
|---|
| Protein GI | 296139998 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC GGGAATCCGT GCTCGGGGTG ACCCCGTTCG AGCTCACCGG CGCCCTGCCC
GCAGGAGCCA CCACCACGGT GCTCGAAGCG AGCGCCGGCA CCGGAAAGAC CTACGCGATC
GTCGGCCTGC TCACCCGGTA CGTGGCCGAG GGGCTCGCCG ACCTCGGCTC CACGCTTCTG
ATCACGTTCT CTCGCGCCGC CACGCAGGAA CTGCGGGAAC GCGCCCGCGC CCGGCTGGTC
GCGGCCGAGG TCGCGTTGCG CGACCCCGAG ACGGCGCGGG TGTGCGGGGA CGAGCTCATC
CGGCACCTCG CCGCGGCGTC ACCGGAGGAG GTGAGGGTGC GGCACCGGCG GCTCGTGGCG
GCGCTCTCGG ATTTCGACGC CGCTACGATC ACCACCACAC ACGGCTTCTG CCAGCGCATG
CTCGACGCTC TCGGGATGGC GGGCGATCTG GAGCCCGGTG TGCAGTTCGT CGAGGACATC
GGCGACCTGG TGCAGGAGGT GGCCGAAGAC GTCTATCTGG GGATGTTCGC CGGCCGCCCG
CACCCACCGT TCCCGCTCGC CACGGCCCTG CTCTATGCGC GCACGGTGGT CGCGAATCCT
CGCGCCGCCG TGACACCGCG CGACGGCGAG CCGGGGACGG ATGTGCAGGC GCGAGTCCGG
TACGCGGAGG CGGTGCGCCG CGAGGTGGAG CGCCGTAAGC GGCTGGGGCG GCTCCGTGAT
TTCGACGACC TCCAGGGCCT GTTGCGCGAG GCCCTCGTCG ACGAGGTGCA CGGTGAGGCG
GCGTGCTCCC GCCTGCGAGA GTTGTACTCG GTGGTCCTGG TCGACGAGTT CCAGGACACC
GATCCGGTGC AGTGGGACAT CCTGCACGCC GCTTTCCACG GACACCGCAC GCTGGTGCTC
GTGGGCGATC CCAAGCAGGC GATCTACGCC TTCCGAGGAG CGGAGGTGTA CAGCTACCTG
GAGGCCTCGA AGGCGGCGAC GACGCACCAG GCACTCGATG TCAACCGCCG GTCCGACGGC
CCACTGGTGA CCGCATTGCA GCACCTGTAC GGCGATGTGG CCCTGGGGGA TACGCAGATC
GTGGTGGGAC CGGTGAGTGC CGCGCGAACG ACTCCGCGCC TGGCCGGACG ACCCCTGCGA
CTGCGGTACC TCGGTTCGAA CGGTGTCGGC CCGAAGACCC AGTACGGCAT CCCGAGAGTT
CCCGGCGTCC GCAAGGCCGT GCTCCGCGAT GTGGCGTCCG ACATCGTCCG TGCCCTGGAC
GCGGGCGAGG AGCTCGATGA CGGCGGGGAG CCGCGCACCG TCGAACCCCG CGACATCGCG
GTACTGGTCC GCAAGAACGA GCACATCGCC GAGCTCCAGT CACTGCTGCA AGGCCTCGGA
GTGGCCGCCG TCGCTGCGGG CGGTGCCAGC GTGTTCACCA CGGCCGCGGC CACCGACTGG
TTACGGCTGC TGCAGGCCCT CGAGAACGCG GGGCGAGCCG ACCGCGCGCG GCTGGCGGCG
CTCACCCCGC TCTTCGAGTT CACCGCCCGC GACCTCGACG AACGCGGCGA CGAGTTGGTC
TCCGAGATCA GCGGGCGGCT GCGCACTCTG GCCGGTGTCT TCGCCCGCTC GGGCTTCGCC
GCGATGTTCG ACGTGCTCGC AGCCGGATCG CGGTTCGACG CGCGGCTGCT CGGCCGCATC
GGTGGTGAGC GCACGTTGAC CGACCTGCGG CACGTCGCCG AACTGGTGCA GCACGCCACC
GTCACCCTCG GGCTCGGGCT GGGAGCCGCC ACCCGGTGGC TGGCCGAGCG CATCGCCGAC
CCCGGTCTCG GTGGCACGGC CGATCCCGCG CGCCGGCTCG CCACCGACAC TCAGGCCGTT
CAACTGATGA CCGTGCACGC CAGTAAGGGC CTGCAATTCC CCATCGTCTA CCTGCCGTTC
GCGTGGGACT CCTTCGGCGG CTTCGGGGAT CGTGACACGT TCATCTTCCA CGAGAACGGT
GAGCGGCTCG TGGATGTGGG TGGCAAGGAC GCCCACGGCT ACGAGGCGCG CCTGGCCATC
TCCCGGGACG AGGATGCGGC GGAGGAACTG CGCCTGCTCT ATGTGGGAGC GACTCGCGCG
CAGTCACGAC TCGTGCTGTG GTGGGCGCCG AGCGCCACCA CGAAGGGGTC TCCGTTGCAC
CGCCTGCTGT TCTCCGAGGT CGGCGGCGGC CGTGTGCCGG CGGGACAAGC GCCGATTCCG
AGGGATGACG AGGCCGGCGC CCGGCTGCGC GAATGGGCTG CGCCCGTGGA GTCTTCGGTG
TCGATCGAGG CGGTCGACCC CGCCGCGCCG GCGCCCGAGC AGTGGCGTCC GCCATTCGCC
GGCTTCCCGT CGCTGGAACT GGGACGAGCG ACCCGGCGGA TCGATCCCAG CTGGCGGCGC
ACCAGCTATT CGGCGCTCGT CGCCGATGCC GCACACGGCC CCCTCGCCGC TCCCGATACG
GGCAGCGAAC CGGATGTCGA GGACCGTGCC GACGAACCGG TCGAGGAACC CGCCGATTCC
GCGACCACGG CCCCGGACGC ACCGCCGTCG CTGATGAACG GCTTGTCCGG CGGCACCGTC
TTCGGCAACC TGGTGCACGA GATCCTCGAA CACGTCGATA CCGGCGCACC GGATATCGCC
GCGGAAGTGC TTGCCCGGTG TCGTGCGGCT GCGGAGTTCG GCACCACCGC CGACGATCCC
GCCGACGTGG CGGCCGCCCT CACTGCGGTG CTGCACACCC CGCTCGGAAC GGGGGAGCTG
TCGACGCTCA CCCTCGCCGA GGTTGCGCCC GCCGATCACC TCGCCGAAAT GGATTTCGAA
CTCCCGCTCG CAGATACCGG ATCGGCCACA CTCGGTACGA TCGCCGATCT CCTGGAGCGA
CATCTGCCCG ACGGCGATCC ACTGGCTCCG TACGCCAGTC GGTTGCGCGA GGTGCCCGGG
GCGGCCCTGC GCGGATTCCT CACCGGCAGC ATCGACTCCG TGCTCCGCGT GCGCACCGGT
GCGGCGGACC GGTTCGTGAT CGTCGACTAC AAGACCAACC GGTTCGCGCG AGGCGATCTG
AGCACGGCGG ACTACACCCC GGACCGCATG GCGGGAGAGA TGATGGGCTC GAACTACGTC
TTGCAGGCGC TGCTGTATTC CGTCGCGCTG CATCGGTTCC TGTCCTGGAA GCTGACCGAT
TACCAGCCGG AGCGGCACCT GGGGGTGGTG CAGTATCACT TCGTGCGCGG CATGGTGGGG
CCCGCGACCC CACCCGGATG CGGTGTCTTC GAGTGGTACC CGCCCGCGGA GCTCATCGTC
GCCGTGTCCG ATGCCCTCGC CGGGCGGTCT TGA
|
|---|
| Protein sequence | MTARESVLGV TPFELTGALP AGATTTVLEA SAGTGKTYAI VGLLTRYVAE GLADLGSTLL
ITFSRAATQE LRERARARLV AAEVALRDPE TARVCGDELI RHLAAASPEE VRVRHRRLVA
ALSDFDAATI TTTHGFCQRM LDALGMAGDL EPGVQFVEDI GDLVQEVAED VYLGMFAGRP
HPPFPLATAL LYARTVVANP RAAVTPRDGE PGTDVQARVR YAEAVRREVE RRKRLGRLRD
FDDLQGLLRE ALVDEVHGEA ACSRLRELYS VVLVDEFQDT DPVQWDILHA AFHGHRTLVL
VGDPKQAIYA FRGAEVYSYL EASKAATTHQ ALDVNRRSDG PLVTALQHLY GDVALGDTQI
VVGPVSAART TPRLAGRPLR LRYLGSNGVG PKTQYGIPRV PGVRKAVLRD VASDIVRALD
AGEELDDGGE PRTVEPRDIA VLVRKNEHIA ELQSLLQGLG VAAVAAGGAS VFTTAAATDW
LRLLQALENA GRADRARLAA LTPLFEFTAR DLDERGDELV SEISGRLRTL AGVFARSGFA
AMFDVLAAGS RFDARLLGRI GGERTLTDLR HVAELVQHAT VTLGLGLGAA TRWLAERIAD
PGLGGTADPA RRLATDTQAV QLMTVHASKG LQFPIVYLPF AWDSFGGFGD RDTFIFHENG
ERLVDVGGKD AHGYEARLAI SRDEDAAEEL RLLYVGATRA QSRLVLWWAP SATTKGSPLH
RLLFSEVGGG RVPAGQAPIP RDDEAGARLR EWAAPVESSV SIEAVDPAAP APEQWRPPFA
GFPSLELGRA TRRIDPSWRR TSYSALVADA AHGPLAAPDT GSEPDVEDRA DEPVEEPADS
ATTAPDAPPS LMNGLSGGTV FGNLVHEILE HVDTGAPDIA AEVLARCRAA AEFGTTADDP
ADVAAALTAV LHTPLGTGEL STLTLAEVAP ADHLAEMDFE LPLADTGSAT LGTIADLLER
HLPDGDPLAP YASRLREVPG AALRGFLTGS IDSVLRVRTG AADRFVIVDY KTNRFARGDL
STADYTPDRM AGEMMGSNYV LQALLYSVAL HRFLSWKLTD YQPERHLGVV QYHFVRGMVG
PATPPGCGVF EWYPPAELIV AVSDALAGRS
|
|---|
| |