| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2262 |
|---|
| Symbol | |
|---|
| ID | 9156418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 2353274 |
|---|
| End bp | 2354359 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF808 |
|---|
| Protein accession | YP_003647210 |
|---|
| Protein GI | 296139967 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.406953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGAG GACTCGCGGC GCTGCTGGAC GACATCGCCG CGCTCGCACG GCTGGCAGCC
GCATCGGTGG ACGACGTGGC CGGCGCGGCC GGACGAGCCA GCGCGAAGGC CGTGGGAGTG
GTGGTCGACG ACACGGCCGT CACCCCGCGC TATGTGCAGG GGATCAAGCC CGAACGCGAG
CTGAGCATCA TCAAGCGCAT CGCGATCGGC TCGCTGCGCA ACAAGCTCCT GATCATCCTG
CCCGCAGCAC TGATCCTCAG CCAGTTCGCG CCGTGGGCGC TCACGCCGAT CCTGATGCTC
GGCGGCACCT ACCTCTGCTA CGAGGGCGCG GAGAAGATCT GGGAGAAGGT CAGTGGCCAC
GGCGACGGCG GGGTCGAGGC ACCGTCGTCC TCGACCGGCC CGGTCGACGA GGACAAGGTG
GTCAGCGGCG CGGTCCGCAC CGACTTCATC CTCTCCGCCG AGATCATGGT CATCGCGCTC
AATGAAGTCG CCGGCGAGAT CCTGTGGCAG CGCGCGGTCA TCCTGATCGT CGTGGCGATC
GCGATCACCG CGCTGGTCTA CGGAGTGGTC GCACTCATCG TGAAGATGGA CGACGTGGGC
CTGGCTCTGT CGAAGAAGTC CTCGCCCACC GTCAGCCGCA TTGGATACGG CCTGGTCAAG
GCCATGCCCG GCGTGCTCAG CACGCTCGCC ACCGTGGGCG TGGTCGCGAT GTGCTGGGTG
GGCGGGCACA TCCTGCTGGT CGGTCTGGAT GAGTTGGGCT GGCACACCCC CTACTCGGTG
GTCCACTCCT TCGAGGTGTG GGTGCACGAC CTGGTGCCCG CGATCGGCGC CGTGACGGGC
TGGCTGGCCA ACACCCTCGC CTCGGCCGTA TTCGGTGTGA TCGTCGGCGG CCTGGTGGTG
CTGATCATGC ACGCCATCCC CACGCGCACG AAGGGCACCC ACGAGGCCGG CCCCGATTCC
CTGGTCGCGG CCGAGACCGC GGCCGTCGAG GACGACCTCG CGGACGCACA GGCCGACGGC
GCCGCCGAGG GCCCGGACGA GCCTCAGACG GGGCCTCAGA CAGGGCCTCA GACGACGGGG
ACGTAG
|
|---|
| Protein sequence | MSGGLAALLD DIAALARLAA ASVDDVAGAA GRASAKAVGV VVDDTAVTPR YVQGIKPERE
LSIIKRIAIG SLRNKLLIIL PAALILSQFA PWALTPILML GGTYLCYEGA EKIWEKVSGH
GDGGVEAPSS STGPVDEDKV VSGAVRTDFI LSAEIMVIAL NEVAGEILWQ RAVILIVVAI
AITALVYGVV ALIVKMDDVG LALSKKSSPT VSRIGYGLVK AMPGVLSTLA TVGVVAMCWV
GGHILLVGLD ELGWHTPYSV VHSFEVWVHD LVPAIGAVTG WLANTLASAV FGVIVGGLVV
LIMHAIPTRT KGTHEAGPDS LVAAETAAVE DDLADAQADG AAEGPDEPQT GPQTGPQTTG
T
|
|---|
| |