Gene Tpau_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2260 
Symbol 
ID9156416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp2350039 
End bp2350644 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003647208 
Protein GI296139965 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0104994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTACG TCGACTCCGC CGTCCGCGCG CCACAGATCG TCGCAGCCGC ACGGCGCGTG 
CTAATCCGCG ACGGCGTGGC CCGCGCTAGC CTGCGCTCCG TGGCCGCCGA GGCCGGAATT 
CCACTCGGCA CCCTGCAACA CGTCTTTCCC AGCAAGCAGC TCCTGCTCCA GGCGGTGATC 
GAGCAGGTGG TGGACGATAT CGCCGACGTG CTGCGGCGCT CGGCGGAGAC CGACGGCGGC 
CTCGAACACG CGATCCGGCG CGGCCTGGCC AACTTCTGGT CCGAACTGGT CGAGGGCCGG 
CGAGAGCTCC AGGCCCTGCA ATACGAGCTG ACTACGCATG CGGTGCGAAC CCCCGGCCTC 
GAGCACCTCG CGCGCGAGCA GTACGAGCGC TACGTCGACG CCGTACGGCA CTGGTGCGTC 
GAGGCCGCTA CCCGCTCCGG GGAGGTCAGT AGCGTCCCCT ACGACCGCCT GGCCCGGCTG 
ACCGTCGCCG CGATCGACGG TCTGATCCTT CAGCAGATCG CCGACCCCGA CCCTGCCCGC 
TCGGCGAACG ATCTCGCGTC GATCGCCGAC ATGATCGTCG GACTGGCAGC CCCGTCAGCC 
GCCTGA
 
Protein sequence
MPYVDSAVRA PQIVAAARRV LIRDGVARAS LRSVAAEAGI PLGTLQHVFP SKQLLLQAVI 
EQVVDDIADV LRRSAETDGG LEHAIRRGLA NFWSELVEGR RELQALQYEL TTHAVRTPGL 
EHLAREQYER YVDAVRHWCV EAATRSGEVS SVPYDRLARL TVAAIDGLIL QQIADPDPAR 
SANDLASIAD MIVGLAAPSA A