Gene Tpau_2258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2258 
Symbol 
ID9156414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp2347869 
End bp2348525 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003647206 
Protein GI296139963 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0562664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGATG GATCGGCCCG CCCACCGCGG CGGACGCAGG AGCAGCGGCG CGAGACGACT 
CGCACCGCGC TGCTCGATGC GACCATCGAG AGCCTCGCCG AGGTGGGGTA CACCGGGACG 
ACCACCCGGG CGGTCGCCGC GCGCGCCGGC CTGACCCACG GAGCCCAGCA GCACCACTAC 
GGGACCAAGC TGGCCCTCGT CGATGCGGCG TTGAAGCGGT TCGCACAGAC TCTCGCCGAG 
TCCGGGCCGG CGGTGCAGAT GGGCCGCCCC GAGTCCACCT CGGTGTCGGA GTGGGACCGC 
TGCGTGGAGC TCCTCGATTC GCTCTGGGAG ATGCACCGGC GCCAGCCCGT CGTGGGGGTC 
ATCTCCGAAA TGCTGGCGCT CTCGCGGACG GATCCGGAGA TCCGGGAACG GATGGCGGAG 
AACTCGACCA TCGCGCACCT CATCGCCCGG TCATCGACCG CGACTGCGCT CCCCGGGTTG 
GCTCGGGTGG ACGGATTCGG CGAATGGGTT CTGACGGTGC TGGCCGCGAT GCGCGGCCTC 
CTCATGCTGC AGCCGCTCGG GTTACAGGGG GAGGCGGGTC AGACGTGGGA TTCGATGCGC 
GATGATCTCC TCGCCGCGCT CCGCTCGAAG GCGGCGGCGC AGGGCGTCGT GGTCTGA
 
Protein sequence
MSDGSARPPR RTQEQRRETT RTALLDATIE SLAEVGYTGT TTRAVAARAG LTHGAQQHHY 
GTKLALVDAA LKRFAQTLAE SGPAVQMGRP ESTSVSEWDR CVELLDSLWE MHRRQPVVGV 
ISEMLALSRT DPEIRERMAE NSTIAHLIAR SSTATALPGL ARVDGFGEWV LTVLAAMRGL 
LMLQPLGLQG EAGQTWDSMR DDLLAALRSK AAAQGVVV