Gene Tpau_2251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2251 
Symbol 
ID9156407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp2340794 
End bp2341357 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content65% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003647199 
Protein GI296139956 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCGA AGAGCAAGTC CGCGCCCACT CGATGGGCGC GGGAACGACT CCTGGACGCA 
GGTCTGCACG TGCTGGCACG ACAGGGGCAT GCGGGCCTCA AGCTCGCATC GGTGTGCGAT 
CACCTCGGCG CGACGACGGG CAGCTTCTAT CACGCCTTTC CTAGTTGGAA CGCGTACCGG 
TCCGATCTGA TCGCCTACTG GCGCGAAGAT CAGAGCCACC GGCTGATCGT CGAGGCGGAA 
GAGATCACCG ACCCGTCTGA ACGCCTCGAA CGCCTCACGC AGATCGGCTT GACCCTGCAT 
TCGGATGTCG AGGCCGCCAT CCGGGTCTGG GCTGCCCATG ACCCTCAGGT GCAGGCTTTC 
CAGGCGGATG TCGATGCCAC CCGCTACGCC GTCATTCGTG ACACTTACCG TGAGCTTCGC 
GACGACGCCG AGCGGGCCGA TGCGTTCGCG CGCATCGCGA TGTATCTGCT GATCGGCTAT 
CAGAGCGGCA CGCTGCGCTC GGATGCCGCT CTGGAGCGCG GATACCGCAT GGTGATCTCC 
GCGGCGCTGA GTGACCCGGA CTGA
 
Protein sequence
MQPKSKSAPT RWARERLLDA GLHVLARQGH AGLKLASVCD HLGATTGSFY HAFPSWNAYR 
SDLIAYWRED QSHRLIVEAE EITDPSERLE RLTQIGLTLH SDVEAAIRVW AAHDPQVQAF 
QADVDATRYA VIRDTYRELR DDAERADAFA RIAMYLLIGY QSGTLRSDAA LERGYRMVIS 
AALSDPD