| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2246 |
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| Symbol | |
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| ID | 9156402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 2335268 |
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| End bp | 2336320 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_003647194 |
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| Protein GI | 296139951 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.73861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACG ACGACACCGC ACAGCGGTTC CCCGAGCGCC GGCGTGGCGC GCGCCGGTCG
CCGGTCACGG TCGGTGCCAT GGGCATTGTG GTGCTGTTGA TGGCCACCGC TTCCGCCTTC
TTCATCGACC GCCTGCCGCT CATCGGCGCC GGCACCACCT ACACCGCGTT GTTCAGCGAG
GCCGCGGGGC TGTTGCCGAG CAACGAGGTC CGGGTGGCCG GCGTCAAGGT GGGGACCGTG
CAGGCCGTCG AACTCGATAC GAAGGCCGCC AAGGCCAAAG TCACGTTCCG GGCGAAAGAC
GTCTGGCTGG GCGAGAACAC CTCCGCCAGC ATTCAGATCA AGACGGTGCT CGGGCAGAAG
TACGTGGCGC TGGAGCCGCG CGGCGCGAAC CGTCTCGATC CCCAACGGCC GATCACCGAC
ACCACGTCGC CGTACGACGT GGTCGCAGCG TTCTCCGACG CCAGCGCATC GATCGACAAG
ACCGACACCA CGAAGTTGGC GGCGAGCATG CGCACGCTGG CGGACGCCTT CCGCGAGACG
CCGCCCAATG TGCGGGAATC ACTCACCGGG ATCACGCGGT TGTCCGAGAC GATCAACAAG
CGCGACGAGG AGCTGCAGCG GCTGCTGGAC CAGGCGGGTA AGACCTCGAA GATCCTCGCC
GACCGGACCG AGACCTTCCG CACGTTGATC ACCGACGCCG GACTGCTGCT CACCACATTG
AATCAGCGGC AGGACGACAT CACCAGGCTG CTGCGCACCA CGCAGTCGTT GTCCACCACA
CTCACGGGAA TCGTGCGCGA CAACGAGCAG CAGATCGGGC CCGCGCTCGC CTCGTTGCGC
CAGGTGGTGC AGCTCCTGCA GGACAACAAG AAGGGGCTCG AGAGCACCAT CACGCTGCTC
GCGCCGTTCT ACAAGGTGTA TGCCAACGTC TTCGGTAACG GTCGCTGGCA GGAGTCGGTG
GTCACCAACC TCACGCCGCC CGGGCTACCG GTGATCCCCG GTTCCCGCGA ACCCGTGCGC
AAGGACCTGT TGACGAACGG GGGGCAGAAG TGA
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| Protein sequence | MTDDDTAQRF PERRRGARRS PVTVGAMGIV VLLMATASAF FIDRLPLIGA GTTYTALFSE
AAGLLPSNEV RVAGVKVGTV QAVELDTKAA KAKVTFRAKD VWLGENTSAS IQIKTVLGQK
YVALEPRGAN RLDPQRPITD TTSPYDVVAA FSDASASIDK TDTTKLAASM RTLADAFRET
PPNVRESLTG ITRLSETINK RDEELQRLLD QAGKTSKILA DRTETFRTLI TDAGLLLTTL
NQRQDDITRL LRTTQSLSTT LTGIVRDNEQ QIGPALASLR QVVQLLQDNK KGLESTITLL
APFYKVYANV FGNGRWQESV VTNLTPPGLP VIPGSREPVR KDLLTNGGQK
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