| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2225 |
|---|
| Symbol | |
|---|
| ID | 9156381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 2316704 |
|---|
| End bp | 2317654 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein |
|---|
| Protein accession | YP_003647173 |
|---|
| Protein GI | 296139930 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.229714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGG ATATCAGGAA GATCGGCATC GTCGGCACCG GAACCATCGG TGCCAGCTGG
GCGGCGTTCT ACCTCTCGCG GGGACTCGAC GTGGCCGCGA CTGACCCGGC CGACGGGGCC
GAAGGCAGGC TCCGCGCATA CGTCGACACC GCTCTCGCGG AGATCAGCGA GCACGGGTTG
CTCCAGCCTG GTTCCGAATC AGCGCAATTG ACATTCGACT CCGACCTCGG ATCCGGCTTG
GCCGGAGTCG ATTTCGTTCA GGAGAACGGC CCGGAGCGGA TCGACATCAA GCACTCACTT
CTGCAGTCCA TCGAAACCGC CGTGGGGCCG GACGTGATCA TCGCGAGCAG CTCGTCCGGC
CTGAAGGTCT CCGATATGCA GGAGGCCATG TCGGCGCCCG AACGCATGAT CCTGGGACAC
CCGTTCAATC CACCGCATGT GGTTCCTCTG GTCGAGGTCG CGGGCGGCAC GAAGACGAGC
GAAGACGTGG TCGCGCGCAC CCTGAGTTTC TACCAGGCGC AGGGCAAGGT GCCGGTGCAT
CTGCGTAAGG AGATGAAGGG CCACATCGCC AATCGGATCC AGGCCGCCGT GGTGCGCGAG
GTCTTCTATC TGGTGCAGGA GGGGGTGGCC TCGGTCGAAG ACATCGACAA GGCGCTGTCG
CAGGGGCCCG GTCTACGGTG GGCGGTGCTC GGACAGTTCG TCAACTCGAG CCTCGGCGGC
GGGCCCGGCG GGTTCAAGGC GATGATGTCG AAGTTCGCAC CCGCGCTGGA AGCGTGGTGG
GCCGACCTCG GCACCATCAC CACGGCGTCC GACGAACTGG TGACGAACAT CAGCGATCAG
TTGGACGCGA TCTTCGCCGA GCACTCCAGC GACAAGATCG CCGCGGCGCG CGATCAAGTG
GTCTTCTCGA CGATCAAGGC CAAGCTCGCG GAGCCCGATC TACCGTACTG A
|
|---|
| Protein sequence | MATDIRKIGI VGTGTIGASW AAFYLSRGLD VAATDPADGA EGRLRAYVDT ALAEISEHGL
LQPGSESAQL TFDSDLGSGL AGVDFVQENG PERIDIKHSL LQSIETAVGP DVIIASSSSG
LKVSDMQEAM SAPERMILGH PFNPPHVVPL VEVAGGTKTS EDVVARTLSF YQAQGKVPVH
LRKEMKGHIA NRIQAAVVRE VFYLVQEGVA SVEDIDKALS QGPGLRWAVL GQFVNSSLGG
GPGGFKAMMS KFAPALEAWW ADLGTITTAS DELVTNISDQ LDAIFAEHSS DKIAAARDQV
VFSTIKAKLA EPDLPY
|
|---|
| |