Gene Tpau_2221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2221 
Symbol 
ID9156377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp2312556 
End bp2313176 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003647169 
Protein GI296139926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCATGG CGTACAAATG CACCATGATC GCTAGGGAAG AAGCTCCGCA GCCGCGTCGG 
CGCACTGGCG GCCGCTCGGC CCGGGTTCGT CGCGCCGTGC TGGAGGCAAC GATCGCCCAG 
CTCGGGGAAC GCGGCCTCGA CGGACTCTCA ATCGCCGAGG TCGCCAGTCA CGCAGGGGTG 
GCCGAGACGA CCGTCTATCG CCGCTGGCCA ACGCGCACCG CGCTCGTGGC GGACGCCGTC 
TCCGACCTGG CTGCGAGCGG GAATCCGGCC CCTGATCTCG GCGACGTCCG CACCGACCTC 
ACTCGAGTTG CTGAGCAGAT TGCGGGGCTC CTCTCCATGC CGGGCATCCC CGGGCTGATC 
GGCACCGTGC TCGCGATGGC GGCCGATCCG CACGTCGCCG CGTCGCGGCA GGAATTCTTC 
GATGCGCGAA TCGGCATGAT TGCCCCCGTC GTCCGTAGGG CGATCGCACG CGGTGAACTG 
GATTCCGGTG TGGACGAACG CGACGTGATC GAGACATTGG CAGCGCCGTT GTACTTCTGC 
GTGGTCGTCG GTGGTGAGTT GGACGACGCG GCTGTGCGGC GGAGTGTGGA CCGATGTCTA 
CGTGTGCACG CCTCGCCCTG A
 
Protein sequence
MCMAYKCTMI AREEAPQPRR RTGGRSARVR RAVLEATIAQ LGERGLDGLS IAEVASHAGV 
AETTVYRRWP TRTALVADAV SDLAASGNPA PDLGDVRTDL TRVAEQIAGL LSMPGIPGLI 
GTVLAMAADP HVAASRQEFF DARIGMIAPV VRRAIARGEL DSGVDERDVI ETLAAPLYFC 
VVVGGELDDA AVRRSVDRCL RVHASP