Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2171 |
Symbol | |
ID | 9156327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 2264080 |
End bp | 2266833 |
Gene Length | 2754 bp |
Protein Length | 917 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_003647120 |
Protein GI | 296139877 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGTCCT CTGAACTGGA GCTGTTCGCC GAGCGCCTCG ACTTCACCCT CGACCCGTTC CAGCGCGACG GCTGCGCCGC CCTCGAGAAC GGGCACGGCG TACTGGTGTG CGCCCCCACC GGCGCCGGCA AGACGGTGGT GGGTGAGTTC GCGGTGCACT TGGCACTCGC CGGCGGCACG AAGTGCTTCT ACACCACGCC GATCAAAGCA CTCTCGAACC AGAAGCACGC GGAGCTCGTG GCCCGGTACG GTGCCGACAA GGTGGGCCTG CTCACCGGCG ATACGTCGAT CAACTCGCAC GCTCCCGTGG TCGTGATGAC GACCGAAGTG CTGCGCAACA TGCTCTACGC GGATTCGCCC ACGCTGGACG GACTGAGTCA CGTGGTGATG GACGAGGTGC ACTACCTCGC CGACCGGTTC CGTGGCGCCG TCTGGGAGGA GGTGATCCTG CACCTCCCTG CCGATGTTCG GCTGGTCAGC CTGTCCGCGA CGGTCTCCAA CGCCGAAGAG TTCGGCGCCT GGATCACCGA GGTCCGCGGC GATACGACCG TCATCGTCGA CGAGAAGCGT CCCGTTCCGC TGTGGCAGCA CATGCTGGTG GGACGCCGCC TGTTCGATCT GTTCGACACC AGGGCGCTGC GCGCCTCCCA GGAATCCGGC GGTAAGAACG CGCTGGTTCT CGACGCCGCT CTGGTGCGCT ACGTCAAGCA ACGCGAATCG CTCGACCGCA GCCGCGACCC CGGCATCGTC AGCCCCACGG GACGGCGTGC CGGACGCGGC AGGCCACAGG CCACCCGGCG CCCCATTCCG CGCCCCGAGG TGATCGCGCT CCTCGATGCC GAGGGGCTCC TACCCGCCAT CACGTTCGTC TTCTCGCGCG CCGGCTGCGA GCAGGCGCTC ACCCAGTGTC TGCGCTCCCC GGTCGTGCTC ACCACGCAGG ACCAGGCCGC GGAGATCGGC GCGATCATCG ACAAGCACGT CGCCGAGTTC TCTCCCGCCG ATCTGGAACT GCTCGGCTTC GAGGAGTGGC GCGCCGCGCT CACGCGGGGG TTCGCCGCTC ACCACGCCGG GATGCTGCCG GCATTCCGGC ACGCCGTCGA GGAACTCTTC GTCAAGGGCC TGGTGCGCGC CGTCTTCGCG ACCGAGACCC TGGCGCTGGG GATCAACATG CCCGCCCGCA CCGTGGTTCT CGAACGGCTC GTGAAGTTCA ACGGGGAGAC CCACAACGAA CTCACACCGG GGGAGTACAC CCAGCTCACC GGCCGCGCCG GCCGGCGCGG TATCGACGTT GAGGGCCACG CCGTGGTGCT CTGGCAGACC GGGGTCCGGC CGCAGGAGGT GGCCGGGCTC GCGGGCGCTC GCACCTTCCC TCTCGTCAGT TCGTTCACGC CCGGTTACAA CATGTCGATC AACCTGGTCG ATCGACTCGG ACGGGCCGGG GCGGAACGGC TGCTCGAAGC GAGCTTCGCC CAATTCCAGG CCGATCGCTC GGTCGTGGGC CTCGCCAAGC GGGTGCAGCG CGGTGAGAAG GAACTCGATC AGCTGCGTGC GCAGATCACC GATGCGGCAG GCGGCGCCGA CTACCTCGAA TACGTCCGGC TGCGTGAAGC CGTGCGCAGC CGCGAGCGTT CGCTGCGGCG CCAGCACCTG TCCGATCGGC GTGACGGTGC CGCCACCGCG TTGGGCGAGC TGCGCCGGGG CGATGTGGTC GCGGTCACCG GCGGCAAACG CCGCGGATTG GCACTCGTCG TGGAGCCATC CGGAGATCGC CGCGATCCCA AGCCGGTCGT GGTCACCGAG AGCGGCTGGT CGGGCAGGGT CGGCGCATCG GACTTCGTCG GCGACCTCCC CGTGCTGGGC ACGCTCCGGG TGCCGAAGAA CGCCGACTAC CGGTCGGGGC GCGGTAAGCG CGACTTGGCT TCGACACTGC GGAACAGCGG AATCTCCGCG CCACGGCAGC AGGCCAAGGC GGCCCGCCCG GCCGCGACGG ACGGAGAGCT CGCAGACCTC CGTGCGCAAA TGCGTGCGCA TCCCGCACAC ACCGGACAGC GGGCAGCCGA ACTCGACCGG CTCGCCGAGC GGTACGCGCG GCTCGAGCGC GAGACGACGG CCGCCGCCGC GACCGTCCGT GCCACCACCT CATCGCTCGC GGTCACCTTC GAGCGGATCG TTGCTCTGCT CGACGATCGC GGCTATCTGG AGACGGTCGA CGGTGACGTG GTGCTCACCG AGGCGGGGCA CCGGTTGGCC CGGGTGTACA GCGAATCCGA TCTCCTGGTG TGCGAGTGCA TCGAGGACGG AGTCTTCGAC GGTCTCGCTC CGGCCGAGCT CGCGGCCGTG GTCTCGGCGA TGGTGTTCGA GTCCCGGGGC GACCGCGGCG GCGCCATCCT GACCGGCGAG CGAGTTCCGG GCGGGGTGCG TTCGGCGGTC CGCGACATCG CCGATCGATG GACCGACATC GTCGCGGCCG AGGCGGCGCA CCGGCTCGAA CCCAGTCGCG AACCCGACGT CGGATTCGTC GCTCCGATGT ATCAGTGGGC GGGCGGGGGC ACCCTCGCCG CCACGCTCAT CGCCGCCGGT GAACGGGGTC AACCGCTGCC TGCTGGTGAC TTCGTCCGGT GGTGCCGGCA GGTGATCGAC CTGCTCGACC AGATCCGCCA GACCTCACTG CAGACCCGGC CCGGTCTCGC CGCGGTCGCG ACGGCTGCGA TCGCCGGGAT TCGGCGCGGC GTCGTCGCCG AATCCGGTGC CTGA
|
Protein sequence | MTSSELELFA ERLDFTLDPF QRDGCAALEN GHGVLVCAPT GAGKTVVGEF AVHLALAGGT KCFYTTPIKA LSNQKHAELV ARYGADKVGL LTGDTSINSH APVVVMTTEV LRNMLYADSP TLDGLSHVVM DEVHYLADRF RGAVWEEVIL HLPADVRLVS LSATVSNAEE FGAWITEVRG DTTVIVDEKR PVPLWQHMLV GRRLFDLFDT RALRASQESG GKNALVLDAA LVRYVKQRES LDRSRDPGIV SPTGRRAGRG RPQATRRPIP RPEVIALLDA EGLLPAITFV FSRAGCEQAL TQCLRSPVVL TTQDQAAEIG AIIDKHVAEF SPADLELLGF EEWRAALTRG FAAHHAGMLP AFRHAVEELF VKGLVRAVFA TETLALGINM PARTVVLERL VKFNGETHNE LTPGEYTQLT GRAGRRGIDV EGHAVVLWQT GVRPQEVAGL AGARTFPLVS SFTPGYNMSI NLVDRLGRAG AERLLEASFA QFQADRSVVG LAKRVQRGEK ELDQLRAQIT DAAGGADYLE YVRLREAVRS RERSLRRQHL SDRRDGAATA LGELRRGDVV AVTGGKRRGL ALVVEPSGDR RDPKPVVVTE SGWSGRVGAS DFVGDLPVLG TLRVPKNADY RSGRGKRDLA STLRNSGISA PRQQAKAARP AATDGELADL RAQMRAHPAH TGQRAAELDR LAERYARLER ETTAAAATVR ATTSSLAVTF ERIVALLDDR GYLETVDGDV VLTEAGHRLA RVYSESDLLV CECIEDGVFD GLAPAELAAV VSAMVFESRG DRGGAILTGE RVPGGVRSAV RDIADRWTDI VAAEAAHRLE PSREPDVGFV APMYQWAGGG TLAATLIAAG ERGQPLPAGD FVRWCRQVID LLDQIRQTSL QTRPGLAAVA TAAIAGIRRG VVAESGA
|
| |