Gene Tpau_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2171 
Symbol 
ID9156327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2264080 
End bp2266833 
Gene Length2754 bp 
Protein Length917 aa 
Translation table11 
GC content70% 
IMG OID 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_003647120 
Protein GI296139877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCCT CTGAACTGGA GCTGTTCGCC GAGCGCCTCG ACTTCACCCT CGACCCGTTC 
CAGCGCGACG GCTGCGCCGC CCTCGAGAAC GGGCACGGCG TACTGGTGTG CGCCCCCACC
GGCGCCGGCA AGACGGTGGT GGGTGAGTTC GCGGTGCACT TGGCACTCGC CGGCGGCACG
AAGTGCTTCT ACACCACGCC GATCAAAGCA CTCTCGAACC AGAAGCACGC GGAGCTCGTG
GCCCGGTACG GTGCCGACAA GGTGGGCCTG CTCACCGGCG ATACGTCGAT CAACTCGCAC
GCTCCCGTGG TCGTGATGAC GACCGAAGTG CTGCGCAACA TGCTCTACGC GGATTCGCCC
ACGCTGGACG GACTGAGTCA CGTGGTGATG GACGAGGTGC ACTACCTCGC CGACCGGTTC
CGTGGCGCCG TCTGGGAGGA GGTGATCCTG CACCTCCCTG CCGATGTTCG GCTGGTCAGC
CTGTCCGCGA CGGTCTCCAA CGCCGAAGAG TTCGGCGCCT GGATCACCGA GGTCCGCGGC
GATACGACCG TCATCGTCGA CGAGAAGCGT CCCGTTCCGC TGTGGCAGCA CATGCTGGTG
GGACGCCGCC TGTTCGATCT GTTCGACACC AGGGCGCTGC GCGCCTCCCA GGAATCCGGC
GGTAAGAACG CGCTGGTTCT CGACGCCGCT CTGGTGCGCT ACGTCAAGCA ACGCGAATCG
CTCGACCGCA GCCGCGACCC CGGCATCGTC AGCCCCACGG GACGGCGTGC CGGACGCGGC
AGGCCACAGG CCACCCGGCG CCCCATTCCG CGCCCCGAGG TGATCGCGCT CCTCGATGCC
GAGGGGCTCC TACCCGCCAT CACGTTCGTC TTCTCGCGCG CCGGCTGCGA GCAGGCGCTC
ACCCAGTGTC TGCGCTCCCC GGTCGTGCTC ACCACGCAGG ACCAGGCCGC GGAGATCGGC
GCGATCATCG ACAAGCACGT CGCCGAGTTC TCTCCCGCCG ATCTGGAACT GCTCGGCTTC
GAGGAGTGGC GCGCCGCGCT CACGCGGGGG TTCGCCGCTC ACCACGCCGG GATGCTGCCG
GCATTCCGGC ACGCCGTCGA GGAACTCTTC GTCAAGGGCC TGGTGCGCGC CGTCTTCGCG
ACCGAGACCC TGGCGCTGGG GATCAACATG CCCGCCCGCA CCGTGGTTCT CGAACGGCTC
GTGAAGTTCA ACGGGGAGAC CCACAACGAA CTCACACCGG GGGAGTACAC CCAGCTCACC
GGCCGCGCCG GCCGGCGCGG TATCGACGTT GAGGGCCACG CCGTGGTGCT CTGGCAGACC
GGGGTCCGGC CGCAGGAGGT GGCCGGGCTC GCGGGCGCTC GCACCTTCCC TCTCGTCAGT
TCGTTCACGC CCGGTTACAA CATGTCGATC AACCTGGTCG ATCGACTCGG ACGGGCCGGG
GCGGAACGGC TGCTCGAAGC GAGCTTCGCC CAATTCCAGG CCGATCGCTC GGTCGTGGGC
CTCGCCAAGC GGGTGCAGCG CGGTGAGAAG GAACTCGATC AGCTGCGTGC GCAGATCACC
GATGCGGCAG GCGGCGCCGA CTACCTCGAA TACGTCCGGC TGCGTGAAGC CGTGCGCAGC
CGCGAGCGTT CGCTGCGGCG CCAGCACCTG TCCGATCGGC GTGACGGTGC CGCCACCGCG
TTGGGCGAGC TGCGCCGGGG CGATGTGGTC GCGGTCACCG GCGGCAAACG CCGCGGATTG
GCACTCGTCG TGGAGCCATC CGGAGATCGC CGCGATCCCA AGCCGGTCGT GGTCACCGAG
AGCGGCTGGT CGGGCAGGGT CGGCGCATCG GACTTCGTCG GCGACCTCCC CGTGCTGGGC
ACGCTCCGGG TGCCGAAGAA CGCCGACTAC CGGTCGGGGC GCGGTAAGCG CGACTTGGCT
TCGACACTGC GGAACAGCGG AATCTCCGCG CCACGGCAGC AGGCCAAGGC GGCCCGCCCG
GCCGCGACGG ACGGAGAGCT CGCAGACCTC CGTGCGCAAA TGCGTGCGCA TCCCGCACAC
ACCGGACAGC GGGCAGCCGA ACTCGACCGG CTCGCCGAGC GGTACGCGCG GCTCGAGCGC
GAGACGACGG CCGCCGCCGC GACCGTCCGT GCCACCACCT CATCGCTCGC GGTCACCTTC
GAGCGGATCG TTGCTCTGCT CGACGATCGC GGCTATCTGG AGACGGTCGA CGGTGACGTG
GTGCTCACCG AGGCGGGGCA CCGGTTGGCC CGGGTGTACA GCGAATCCGA TCTCCTGGTG
TGCGAGTGCA TCGAGGACGG AGTCTTCGAC GGTCTCGCTC CGGCCGAGCT CGCGGCCGTG
GTCTCGGCGA TGGTGTTCGA GTCCCGGGGC GACCGCGGCG GCGCCATCCT GACCGGCGAG
CGAGTTCCGG GCGGGGTGCG TTCGGCGGTC CGCGACATCG CCGATCGATG GACCGACATC
GTCGCGGCCG AGGCGGCGCA CCGGCTCGAA CCCAGTCGCG AACCCGACGT CGGATTCGTC
GCTCCGATGT ATCAGTGGGC GGGCGGGGGC ACCCTCGCCG CCACGCTCAT CGCCGCCGGT
GAACGGGGTC AACCGCTGCC TGCTGGTGAC TTCGTCCGGT GGTGCCGGCA GGTGATCGAC
CTGCTCGACC AGATCCGCCA GACCTCACTG CAGACCCGGC CCGGTCTCGC CGCGGTCGCG
ACGGCTGCGA TCGCCGGGAT TCGGCGCGGC GTCGTCGCCG AATCCGGTGC CTGA
 
Protein sequence
MTSSELELFA ERLDFTLDPF QRDGCAALEN GHGVLVCAPT GAGKTVVGEF AVHLALAGGT 
KCFYTTPIKA LSNQKHAELV ARYGADKVGL LTGDTSINSH APVVVMTTEV LRNMLYADSP
TLDGLSHVVM DEVHYLADRF RGAVWEEVIL HLPADVRLVS LSATVSNAEE FGAWITEVRG
DTTVIVDEKR PVPLWQHMLV GRRLFDLFDT RALRASQESG GKNALVLDAA LVRYVKQRES
LDRSRDPGIV SPTGRRAGRG RPQATRRPIP RPEVIALLDA EGLLPAITFV FSRAGCEQAL
TQCLRSPVVL TTQDQAAEIG AIIDKHVAEF SPADLELLGF EEWRAALTRG FAAHHAGMLP
AFRHAVEELF VKGLVRAVFA TETLALGINM PARTVVLERL VKFNGETHNE LTPGEYTQLT
GRAGRRGIDV EGHAVVLWQT GVRPQEVAGL AGARTFPLVS SFTPGYNMSI NLVDRLGRAG
AERLLEASFA QFQADRSVVG LAKRVQRGEK ELDQLRAQIT DAAGGADYLE YVRLREAVRS
RERSLRRQHL SDRRDGAATA LGELRRGDVV AVTGGKRRGL ALVVEPSGDR RDPKPVVVTE
SGWSGRVGAS DFVGDLPVLG TLRVPKNADY RSGRGKRDLA STLRNSGISA PRQQAKAARP
AATDGELADL RAQMRAHPAH TGQRAAELDR LAERYARLER ETTAAAATVR ATTSSLAVTF
ERIVALLDDR GYLETVDGDV VLTEAGHRLA RVYSESDLLV CECIEDGVFD GLAPAELAAV
VSAMVFESRG DRGGAILTGE RVPGGVRSAV RDIADRWTDI VAAEAAHRLE PSREPDVGFV
APMYQWAGGG TLAATLIAAG ERGQPLPAGD FVRWCRQVID LLDQIRQTSL QTRPGLAAVA
TAAIAGIRRG VVAESGA