Gene Tpau_2160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2160 
Symbol 
ID9156316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp2254995 
End bp2255723 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content67% 
IMG OID 
Product20S proteasome A and B subunits 
Protein accessionYP_003647110 
Protein GI296139867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTCC CGTACTACGC ATCCGCCGAA CAGATCATGC GCGATCGCTC GGAGCTCGCG 
CGCAAGGGCA TCGCCCGCGG GCGCAGCGTC GTGGTTCTGA AGTACGCCGA CGGCGTGCTG 
TTCGTGGCCG ACAATCCGAG CTCGCTCAAC AAGGTCAGTG AGATCTACGA CCGCATCGGG 
TTCGCCGCTG TGGGCAAGTA CAACGAATTC GAGTCGCTGC GCCGCGCCGG CATCCAGTTC 
GCCGATACTC GCGGTTATCA GTACTCGCGA CGCGATGTGA CCGGGTGGTC GCTCGCGAAC 
GCCTACGCGT CGACGCTCGG CACGGGTTTC ACCGAGCAGG CCAAGCCGTT CGAAGTGGAG 
CTGTGCGTGG CCGAGGTTGC GGGACCGGAG ACCTCAGGGC CCGGCTCAGC GCGGCTGTAC 
CGCGTGGGCT ATGACGGGTC GATCGGCGAC GAGAAGGCCT TCATCGTGAT GGGTGGCCAG 
ACCGAGGCGA TCAGCCCGGT GCTCACCGAG GGCTACGAGA ACGATCTGGA GCTGGGCGCG 
GCGCTGTCGT TGGCGGCGAA GGCGCTCGGT GCGCCCGCAC CGTCGAACGG CTCGTCATCC 
TCGTCGACAC CGGCTGAGGC GAAGACCTTC GCCGCCGGTG AGTTGGAAGT GGCGATCCTC 
GACCGCACCC GCCCGCGACG CGCCTTCAAA CGGCTCACCG ACGACAGGGT CGCCGAACTG 
CTGGGGTAG
 
Protein sequence
MTFPYYASAE QIMRDRSELA RKGIARGRSV VVLKYADGVL FVADNPSSLN KVSEIYDRIG 
FAAVGKYNEF ESLRRAGIQF ADTRGYQYSR RDVTGWSLAN AYASTLGTGF TEQAKPFEVE 
LCVAEVAGPE TSGPGSARLY RVGYDGSIGD EKAFIVMGGQ TEAISPVLTE GYENDLELGA 
ALSLAAKALG APAPSNGSSS SSTPAEAKTF AAGELEVAIL DRTRPRRAFK RLTDDRVAEL 
LG