| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2159 |
|---|
| Symbol | |
|---|
| ID | 9156315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 2254177 |
|---|
| End bp | 2254998 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | 20S proteasome A and B subunits |
|---|
| Protein accession | YP_003647109 |
|---|
| Protein GI | 296139866 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCCCGC CGCGGCGCGG CGATTCGATG CAGGTTCTGC ACGGCGGCTC GTCGTTCGTC
GAGCACCTCG CTGCGGTGGC GCCCGAGGCG CTGCCCGGCC GGGTCGCCGG GTTCGACGGT
GCGCCGGACG TCCCGCACGG CACGACGATC GTCGCGATCA AGTTCGACGG TGGCGTGCTG
ATCGCGGGCG ACCGCCGCGC CACGATGGGC CACCTGATCG CGCAGCGCGA CATCACCAAG
ACCTTCGTCA CCGACGATCT GACCGCCGTC GGCATCGCCG GCACGGCGGG CATCGCCAAG
CAGATCGTGA AGCTGTTCAC GGTGGAGCTG GAGCACTACG AGAAGATCGA GGGCGTCCCG
CTCACGTTCG ACGGCAAGGC CAATCGCCTC GGCGGCATGG TGCGCAGCAA CTTCGGTGCC
GCGCTGCAGG GCCTAGTCGC GGTCCCGCTG CTGGTCGGAT TCGACGACGC CGATGCCCGC
GGTCGGATCG TGTCCTACGA CGTGACGGGT GACTGGCACG ACGAGGTGGA CTACCACTCG
ATCGGATCGG GTTCGGCCTG GGCGAAGTCC TCGATCAAGA AGCGTTTCCG GCACGGACTC
GATGCCGACG GCGCGCTCGA TGTCGCGGCT GAGGCTCTGT TCGATGCGGC CGATGACGAC
ACCGCGACCG GCGGACCGGA TGTACTGCGC AACCTGTACC CGACCGCCAT CGCGATCACT
TCCGACGGCG CGGTCGAGGT GGCCGAGGCG TCCGTGTCCG CGGCCACCGA GCGCGTGATC
GCCCGGCGAT CCGAGGCGAA CGGCGGGGGA GGTGCGCGAT GA
|
|---|
| Protein sequence | MTPPRRGDSM QVLHGGSSFV EHLAAVAPEA LPGRVAGFDG APDVPHGTTI VAIKFDGGVL
IAGDRRATMG HLIAQRDITK TFVTDDLTAV GIAGTAGIAK QIVKLFTVEL EHYEKIEGVP
LTFDGKANRL GGMVRSNFGA ALQGLVAVPL LVGFDDADAR GRIVSYDVTG DWHDEVDYHS
IGSGSAWAKS SIKKRFRHGL DADGALDVAA EALFDAADDD TATGGPDVLR NLYPTAIAIT
SDGAVEVAEA SVSAATERVI ARRSEANGGG GAR
|
|---|
| |