| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2144 |
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| Symbol | |
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| ID | 9156300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 2235284 |
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| End bp | 2239015 |
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| Gene Length | 3732 bp |
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| Protein Length | 1243 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | methionine synthase |
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| Protein accession | YP_003647094 |
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| Protein GI | 296139851 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.212238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCTCCT TTGAGCCGAA CATCCGCCCC GACTGCACCG ACGAGCTGGC GGCTACTCTG
CGCCGGCGGA TCATGGTGAT CGACGGCGCG ATGGGCACGG CGATCCAGCG GGACCGGCCG
GATGAGGATG GATACCGCGG CGAGCGGTTC ACGGAGTGGC CGACGGCTCT TCAGGGCAAC
AATGACCTGC TCAATCTGAC GCAGCCGCAG ATCATCGAGG GGATCCACCG CGAATATCTC
GAGGCGGGCG CAGACATCCT GGAGACGAAC ACGTTCAACG CGAACGCGAT CTCGCTCTCC
GACTACGACA TGGGCGAGCT GAGTTACGAG CTGAACTTCG TCGGTGCCGC CCTGGCTCGC
AAGGTATGTG ACGAGTTCAG CACCGCGGAC AAGCCCCGCT ACGTCGCCGG CGCCCTCGGG
CCGACGACGC GGACCGCGTC GATCTCGCCG GAAGTCAACG ATCCGGGGGC CCGCAACGTC
TCCTACGATC AACTGGTCGC CGCCTACCTC GAAGCTGTCA ACGGCCTTGT CGACGGTGGT
TCAGATGTGA TCCTCATCGA GACGATCTTC GATTCGCTCA ACGCCAAGGC GGCGGTGTTC
GCGGTCGAGA CGCTGTTCGA GGATCGCGGG CGCCGCTGGC CGGTGATCAT CTCGGGGACG
ATCACTGATG GTTCTGGGCG GACGTTATCC GGTCAGGTCA CGGAAGCATT CTGGAACGCG
ATCAGGCACG CGAAGCCGAT AGCGGTGGGT CTCAATTGCG CCCTGGGTGC GCCGGAGATG
AGGCCCTACA TCGCCGAGAT GGCGCGGATC TCGGACACGT TCGTCTCCTG CTATCCGAAC
GCGGGCCTGC CGAACGCCTT CGGCGAGTAC GACGAGTCTC CGGAGCACCA GGCCGCCTAC
CTGGCCGAAT TCGCCGAGGC CGGTCTGGTC AACCTGGTGG GCGGCTGCTG CGGTACGGCG
CCGGCGCACA TCGCCGAGAT CGCCAGGGTC GTCGAGGGCA CGCCGCCGCG TGAGATTCCG
CAACTCTCGG TGGCCACCAG GCTGTCGGGT CTGGAACCGC TCAACATCAC CGCCGACTCC
CTGTTCGTGA ACATCGGCGA ACGCACCAAT ATCACCGGCT CGGCACGGTT CCGCAACCTG
ATCAAGGCGG AGGACTACGA CACCGCCCTG TCAGTCGCCC TGCAACAGGT CGAGGTCGGT
GCCCAGGTCA TCGACATCAA CATGGACGAG GGAATGATCG ACGGTGTCGC CGCGATGGAC
CGGTTCACCA AGCTGATCGC GGCCGAACCG GATATCAGTC GTGTCCCGGT GATGATCGAC
TCCTCCAAGT GGGAGGTCAT CGAAGCCGGC CTGAAGAACG TGCAGGGCAA GCCGATCGTC
AACTCGATCT CGTTGAAGGA GGGCGAGGAG AAGTTCATCC GCGAGGCGCG GCTGTGCCGC
AAGTACGGCG CCGCCGTCGT TGTGATGGCC TTCGACGAAC AGGGGCAGGC CGATAACCTG
GAACGTCGTA AGGAGATCTG CGGGCGCGCC TACCGGATCC TGACCGAAGA GGTCGGCTTC
CCGGCCGAGG ACATCATCTT CGACCCGAAC TGCTTCGCAT TGGCGACCGG TATCGAGGAG
CACGCGACCT ACGGCATCGA CTTCATCGAG GCCTGTGCCT GGATCAAGGA GAACCTCCCC
GGGGTGCACA TCTCCGGTGG CATCTCGAAC GTGTCGTTCT CCTTCCGTGG CAACAACCCC
GTGCGCGAGG CCATCCACGC GGTGTTCCTG TTCCACGCCA TCAAGGCCGG ATTGGACATG
GGCATCGTCA ACGCCGGAGC CCTGGTGCCG TACGACGCGA TCGACCCCGA GCTGCGGGAC
CGCATCGAGG ACGTGGTGCT CAACCGTCGC GAGGACGCGG CCGAACGGCT CTTGGAGATC
GCCGAGCAGT TCAACAAGTC CGAGAAGGCC GAGGATCCCA AGGCCGCCGA GTGGCGCGGC
CTCCCGGTGC GCGAGCGGAT CACGCACGCC CTGGTCAAGG GCATCGACGC CGATGTCGAG
ACCGACACCG AGGAGTTGCG CGCCGAGATC GCCGCTGCGG GAGGGCGGCC GATCGAGGTG
ATCGAGGGGC CGCTGATGGA CGGTATGAAC GTTGTCGGTG ACCTCTTCGG TGCAGGCAAG
ATGTTCCTCC CCCAGGTCGT GAAGTCGGCG CGGGTGATGA AGAAGGCCGT GGCCTACCTG
CTGCCGTACA TCGAGGCGGA GAAGGACGAG TCGGGCGCCG CGAGTAAGGA CACCAACGGC
ACCATCATCA TGGCGACGGT GAAGGGCGAT GTTCACGACA TCGGCAAGAA CATCGTCGGG
GTCGTCCTTC AGTGCAACAA CTACGAGGTG ATCGACCTCG GCGTGATGGT GCCCGCCGAG
AAGATCCTGG CCGCCGCCAA GGAGTACGAC GCTGACATCA TCGGTCTGTC CGGCCTGATC
ACCCCGTCTC TGGACGAGAT GGTCAACTTC GCCGTCGCGA TGGAACGCGA AGGGTTGGAC
ATCCCGCTCC TGATCGGTGG CGCGACGACG TCCCGCGCGC ACACGGCCGT GAAGGTGTCG
CCACGCCGCA GCGGTCCGGT CGTCTGGGTC AAGGACGCCT CGCGTTCGGT GCCGGTGGCG
GCCGCGCTGC TCGACGACAG GCAGCGTCCG GCCCTACTGG AGGCCACCGA GGCCGATTAC
GCCGCGCTGC GCGAACGGCA CGCCCAGAAG AGTGAACGGC CGATGCTGAC GCTGGAGAAG
GCTCGCGCCA ACCGGACGCC GATCGAGTGG GCCGCCTATA CGCCGCCGGT GCCCGCCCAG
GGGCTCGGCG TCCGTGAGTT CTTGGATTAC GACCTCGCTG AGCTGCGCGA GTACATCGAC
TGGCAGCCGT TCTTCAACGC GTGGGAAATG AAGGGCCGGT TCCCTGACAT CCTCAACAAT
CCGGTCTCGG GCGAGACCGC CCGCAAGCTG TACGACGATG CCCAGACGAT GCTCGACACC
CTGATCAAGG AGAAGTGGCT CACCGCCAAC GGCGTGATCG GGTTCTTCCC CGCGAACGCC
GTCGGCGACG ATATCGAGGT CTACACCGAC GAGACCCGTA CCGACGTGCT GACCAGATTG
CACAACCTGC GCCAGCAGGG CGAACACCGC GACGGCATCC CGAACCGGAG CCTCGGCGAC
TTCGTTGCGC CGAAGGACAC CGGTCTGGCC GATTACGTCG GTGCCTTCGC CGTCACCACG
GGCCTCGGCA GCGCCGCCAA GATCGTCGAG TTCAAGGCTG CTAACGACGA CTACAACGCA
ATCCTGCTGG AGTCGCTCGC CGACCGATTG GCTGAGGCCT TCGCAGAACG GATGCATCAA
CGGGTCCGTA CGGAGTTCTG GGGATTCCAG CCTGACGAGG ATCTCGACAA CGAGGCGCTC
ATCGATGAGA AATATGTGGG AATCCGCCCT GCTCCCGGTT ACCCGGCCTG CCCGGAACAC
ACCGAGAAGG CGACACTCTG GGAGTTGATG AACGTCCACG AGCGGACCGG CATCGAGCTG
ACCGAGTCGA TGGCGATGTG GCCCGGTGCC GCCGTCAGCG GCTGGTACTT CTCGCATCCG
CAGTCGCAGT ACTTCGTGGT CGGCCGGTTG GCGCAGGACC AGGTAGCAGA CTACGCGAAG
CGCAAGGGCT GGACTCTGCA GGAAGCCGAG CGCTGGCTCA GCCCCAACCT CGGCTACAAC
CCGGAGGACT GA
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| Protein sequence | MSSFEPNIRP DCTDELAATL RRRIMVIDGA MGTAIQRDRP DEDGYRGERF TEWPTALQGN
NDLLNLTQPQ IIEGIHREYL EAGADILETN TFNANAISLS DYDMGELSYE LNFVGAALAR
KVCDEFSTAD KPRYVAGALG PTTRTASISP EVNDPGARNV SYDQLVAAYL EAVNGLVDGG
SDVILIETIF DSLNAKAAVF AVETLFEDRG RRWPVIISGT ITDGSGRTLS GQVTEAFWNA
IRHAKPIAVG LNCALGAPEM RPYIAEMARI SDTFVSCYPN AGLPNAFGEY DESPEHQAAY
LAEFAEAGLV NLVGGCCGTA PAHIAEIARV VEGTPPREIP QLSVATRLSG LEPLNITADS
LFVNIGERTN ITGSARFRNL IKAEDYDTAL SVALQQVEVG AQVIDINMDE GMIDGVAAMD
RFTKLIAAEP DISRVPVMID SSKWEVIEAG LKNVQGKPIV NSISLKEGEE KFIREARLCR
KYGAAVVVMA FDEQGQADNL ERRKEICGRA YRILTEEVGF PAEDIIFDPN CFALATGIEE
HATYGIDFIE ACAWIKENLP GVHISGGISN VSFSFRGNNP VREAIHAVFL FHAIKAGLDM
GIVNAGALVP YDAIDPELRD RIEDVVLNRR EDAAERLLEI AEQFNKSEKA EDPKAAEWRG
LPVRERITHA LVKGIDADVE TDTEELRAEI AAAGGRPIEV IEGPLMDGMN VVGDLFGAGK
MFLPQVVKSA RVMKKAVAYL LPYIEAEKDE SGAASKDTNG TIIMATVKGD VHDIGKNIVG
VVLQCNNYEV IDLGVMVPAE KILAAAKEYD ADIIGLSGLI TPSLDEMVNF AVAMEREGLD
IPLLIGGATT SRAHTAVKVS PRRSGPVVWV KDASRSVPVA AALLDDRQRP ALLEATEADY
AALRERHAQK SERPMLTLEK ARANRTPIEW AAYTPPVPAQ GLGVREFLDY DLAELREYID
WQPFFNAWEM KGRFPDILNN PVSGETARKL YDDAQTMLDT LIKEKWLTAN GVIGFFPANA
VGDDIEVYTD ETRTDVLTRL HNLRQQGEHR DGIPNRSLGD FVAPKDTGLA DYVGAFAVTT
GLGSAAKIVE FKAANDDYNA ILLESLADRL AEAFAERMHQ RVRTEFWGFQ PDEDLDNEAL
IDEKYVGIRP APGYPACPEH TEKATLWELM NVHERTGIEL TESMAMWPGA AVSGWYFSHP
QSQYFVVGRL AQDQVADYAK RKGWTLQEAE RWLSPNLGYN PED
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