Gene Tpau_2129 details

Gene Information

• Locus tag: Tpau_2129
• ID: 9156285
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2220632
• End bp: 2221168
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 71%
• Product: PEBP family protein
• Protein accession: YP_003647079
• Protein GI: 296139836

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.643406
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGAGA AGTTCGACCC GTACGCGCCG CTCCCGCTGC TGCCGGCGTT CACGCTGACC 
TCCACCACCA TCGCCGAAGG CGGCACCCTC GCCTCCCCGC AACTGAGCGG AATCTTCGGT 
GCCGGTGGAC AGGACGTCTC GCCGCAGCTC TCGTGGTCGG GGTTCCCGGC GCAGACCAAG 
TCCTTCGCGG TCACGGCCTA CGATCCCGAT GCGCCCACCG CGTCCGGTTT CTGGCACTGG 
GCGGTCGCGA ACATCCCCGC GTCGGTGACC GAGCTGGCCG AGGACGCCGG TAACGGTGCC 
CCCGGTTCTC TGCCCGACGG TGCCGTGACG CTCACCAACG ACGGCGGCAT CAAGCGCTTC 
CTGGGGGCCG CACCGCCCGC GGGCCACGGT CCGCACCGCT ACATCTTCGC GGTGCACGCC 
CTGGGCGTGG ACACGCTCGA CCTGCCGGAG ACCGCGACCC CGGCGTTCCT GGGCTTCAAT 
CTGTTCGGTA CGGCCATCGC CCGCGCCACC CTGACGGCGA CCTACGCGCA GGTGTAG 

 

Protein sequence

MTEKFDPYAP LPLLPAFTLT STTIAEGGTL ASPQLSGIFG AGGQDVSPQL SWSGFPAQTK 
SFAVTAYDPD APTASGFWHW AVANIPASVT ELAEDAGNGA PGSLPDGAVT LTNDGGIKRF 
LGAAPPAGHG PHRYIFAVHA LGVDTLDLPE TATPAFLGFN LFGTAIARAT LTATYAQV