| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2105 |
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| Symbol | |
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| ID | 9156260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 2193955 |
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| End bp | 2196192 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_003647056 |
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| Protein GI | 296139813 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACA CCACGATCGG CAGCTTCGCC GACATCCCGT TCGACTCCGA CGCCCCTGCA
CCGGAGGCAC CCCGTGCGGC GGATGTCGAC GCATTCGTCG AGGCCGCCGC CCAGGCCCAC
GCCTACACGC CCGACCAACT GGTGTGGTCG ACCCCGGAGG GGATCGACGT CAAACCGGTG
TACACGCGCG CCGACCGCGA GGCCATCGCC GACGCCGGGT ATCCGGTCGA CTCGTACCCC
GGGGCGGTGC CCTTCATCCG CGGCCCGTAC CCGACGATGT ACGTCAACCA GCCGTGGACG
ATCCGCCAGT ACGCCGGTTT CTCCACCGCC GCCGAGTCCA ACGCCTTCTA CCGCCGGAAC
CTGGCCGCCG GTCAGAAGGG ACTCTCGGTC GCCTTCGACC TCGCGACCCA CCGCGGCTAC
GACTCGGACC ACCCGCGCGT CACCGGCGAC GTGGGCATGG CGGGCGTGGC GATCGACTCG
ATCCTCGATA TGCGGCAGCT GTTCGACGGC ATCGACCTGG GCGGTGTCTC CGTCTCCATG
ACCATGAACG GCGCGGTGCT GCCGATCCTC GCGCTCTACG TGGTCGCGGC CGAGGAGCAG
GGAGTGGGCC CTGAGAAGCT CGCGGGCACC ATCCAGAACG ACATCCTCAA AGAGTTCATG
GTGCGCAACA CCTACATCTA TCCGCCCGCG CCGTCCATGC GGATCATCTC GGACATCTTC
GCCTTCACCT CGCAGAAGAT GCCCAAGTTC AACTCGATCT CGATCTCCGG CTATCACATC
CAGGAAGCCG GTGCCACAGC CGATCTGGAG CTCGCGTACA CGCTGGCCGA CGGTGTCGAG
TACATCAAGG CCGGTATCGA CGCGGGCCTG GACGTGGACA CCTTCGCACC GCGTCTGTCC
TTCTTCTGGG GCATCGGGAT GAACTTCTTC ATGGAGGTCG CGAAGCTCCG CGCTGCGCGC
TTACTGTGGA GCGAACTGGT CGCGGAGTTC GATGCGAAGA ACAGCAAGTC GCTCTCGTTG
CGCACCCATT CGCAGACCTC GGGCTGGTCG CTCACCGCGC AGGACGTGTT CAACAACGTC
GCCCGGACCT GTGTCGAGGC GATGGCCGCG ACGCAGGGAC ACACCCAGTC GTTGCACACC
AACGCCCTCG ACGAGGCGAT CGCCCTCCCC ACCGACTTCT CGGCCCGCAT CGCCCGCAAC
ACGCAGCTCG TGCTGCAGCA GGAGTCCGGC ACCACCCGGC CGATCGACCC GTGGGGCGGC
TCGTACTACG TCGAGACACT CACCCACGAG CTGGCCGAGC GCGCCCGCGC GCACATCCGA
GAGGTGCAGG AGGCGGGTGG CATGACCAAG GCGATCGCCG AGGGCATCCC GAAGCTCCGC
ATCGAGGAGG CCGCGGCGCG CACACAGGCG CGCATCGATT CGGGGCGCCA ACCCGTGATC
GGCGTGAACA AGTACCAGGT TCCCGAGGAC GCGGAGATCG AGATCCTCAA GGTGGAGAAT
TCCCGGGTGC GCGCCGAGCA GCTCGCGAAA CTGGAGCAGC TCCGCGCCGA GCGCAACGAC
GCCGAGGTCT CCGCCGCATT GGCGAATCTG TCGCGGGCCG CCGGCTCGAG CGAAGGCGGA
CTGGAGAACA ACCTGCTCGC CCTGGCCATC GACGCGGCGC GGGCCAAGGC CACCGTCGGT
GAGATCTCCG ATGCGCTCGA GAAGGTCTAC GGGCGACACC AGGCCGAGAT CCGTACGCTC
AGTGGCGTGT ATCGCGATGA AGCCGGCTCG TCGGACACCA TCACGACCGC TTCCGATCTG
GTGGCGAAGT TCGAGGAGGC CGACGGCCGC CGCCCCCGCG TGCTGGTCGC CAAGATGGGC
CAGGACGGGC ACGACCGCGG CCAGAAGGTG ATCGCGACCG CGTTCGCCGA TCTCGGCTTC
GATGTCGACG TGGGTCCGCT GTTCTCCACG CCCGAGGAGG TCGCGCAGCA GGCCGCGGAC
AACGATGTGC ACGTGGTGGG CGTCTCCAGC CTCGCCGCCG GGCACCTCAC GCTGGTTCCG
GCGCTCCGCG ATGCGCTCGC CGCGGTCGAC CGGCCGGACA TCATGATCGT CGTGGGCGGC
GTGATTCCGC CCGGCGATTT CGACGAGCTG TACTCGGCCG GTGCCTCGGC GATCTTCCCG
CCCGGCACCG TGATCGCGGA CGCCGCGGTC GATCTGCTCC GCGGGCTCGG GGACACGTTG
GGGTACGACC TGGCGTGA
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| Protein sequence | MTDTTIGSFA DIPFDSDAPA PEAPRAADVD AFVEAAAQAH AYTPDQLVWS TPEGIDVKPV
YTRADREAIA DAGYPVDSYP GAVPFIRGPY PTMYVNQPWT IRQYAGFSTA AESNAFYRRN
LAAGQKGLSV AFDLATHRGY DSDHPRVTGD VGMAGVAIDS ILDMRQLFDG IDLGGVSVSM
TMNGAVLPIL ALYVVAAEEQ GVGPEKLAGT IQNDILKEFM VRNTYIYPPA PSMRIISDIF
AFTSQKMPKF NSISISGYHI QEAGATADLE LAYTLADGVE YIKAGIDAGL DVDTFAPRLS
FFWGIGMNFF MEVAKLRAAR LLWSELVAEF DAKNSKSLSL RTHSQTSGWS LTAQDVFNNV
ARTCVEAMAA TQGHTQSLHT NALDEAIALP TDFSARIARN TQLVLQQESG TTRPIDPWGG
SYYVETLTHE LAERARAHIR EVQEAGGMTK AIAEGIPKLR IEEAAARTQA RIDSGRQPVI
GVNKYQVPED AEIEILKVEN SRVRAEQLAK LEQLRAERND AEVSAALANL SRAAGSSEGG
LENNLLALAI DAARAKATVG EISDALEKVY GRHQAEIRTL SGVYRDEAGS SDTITTASDL
VAKFEEADGR RPRVLVAKMG QDGHDRGQKV IATAFADLGF DVDVGPLFST PEEVAQQAAD
NDVHVVGVSS LAAGHLTLVP ALRDALAAVD RPDIMIVVGG VIPPGDFDEL YSAGASAIFP
PGTVIADAAV DLLRGLGDTL GYDLA
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