| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2097 |
|---|
| Symbol | |
|---|
| ID | 9156252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 2185452 |
|---|
| End bp | 2186321 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003647048 |
|---|
| Protein GI | 296139805 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACTG TCGTGGCCCC GCCCGCCGAG CCGTCGCATG CGGTCCTGGC CGGGAAACGC
GCCCCACGAT GGCTTTGGGC ATTGCCGCCG GTCGCGTTCG TCGTGGTGGC GGTGGCGTAC
CCGCTGACCG GAGTCGTCGC CCGGACCTTC ACCGACAAGG CCGAGCGCCC AGCGGGCTTG
GCCACCTGGC GCGAGACCCT CACCGACGGT GCCGTTCTCC GGGCGCTCGG CACGACGATC
CAGGTGGCGG CGCTGTCGAC GATCGGCTGC CTCATCGCCG GTACCTTTCT CGCGCTCGTG
CTCGCCTACG TCCCGTTTCC GGGAGCTCCC GCGGTGGTAC GGCTCATCGA GGTCGTCGTC
TCGTTCCCCA GCTTCCTCAT TCCGCTGGCC CTGGGCGTAC TCCTGGGACC GGTAGGCGTG
ATCAACGCCG CGATCACGCC GCTCGGACTG TCGACCGGGG CGTTCAGCAC ATCGCTGTGG
GGTGTGGTGC TGGCCGAGAT CGCCTTCTAC ACACCATTCG TGGTGCGCCC CGTGCTCGCT
GCATTCGGAC AGCTCCCGGC GGCGCAGATC AACGTGGCGT CCTCGCTCGG TGCGGCACCG
GCGAGGATCG TCGCCCGGGT GATCCTTCCC GCCGCGTATC CGGCGCTCGT TGCCGCCGCC
TCCCTGACCT TTTTGTTGAC ACTCAATGAG TTCGGGATCG TGCTGTTCAC CGGGGCGAAA
GACGTGATCA CCCTCCCGAT GCTCGTCTAC ACCCGCTCGA TCGTCGGCCA GGACTTCGCC
TCGGCCGCCG TACTCGCCAC CGTGCAACTG ATCCTCTCAG TGGGTGCGTA CCTGCTGTAT
CGCTCGTTCA CCCGTCAGGA GGCGCACTGA
|
|---|
| Protein sequence | MSTVVAPPAE PSHAVLAGKR APRWLWALPP VAFVVVAVAY PLTGVVARTF TDKAERPAGL
ATWRETLTDG AVLRALGTTI QVAALSTIGC LIAGTFLALV LAYVPFPGAP AVVRLIEVVV
SFPSFLIPLA LGVLLGPVGV INAAITPLGL STGAFSTSLW GVVLAEIAFY TPFVVRPVLA
AFGQLPAAQI NVASSLGAAP ARIVARVILP AAYPALVAAA SLTFLLTLNE FGIVLFTGAK
DVITLPMLVY TRSIVGQDFA SAAVLATVQL ILSVGAYLLY RSFTRQEAH
|
|---|
| |