Gene Tpau_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2078 
Symbol 
ID9156233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2168684 
End bp2169772 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content69% 
IMG OID 
ProductATPase associated with various cellular activities AAA_3 
Protein accessionYP_003647029 
Protein GI296139786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTCACT CTCAGGGGCG CGACACCGCA TCGAGCGATG AGGTCAAGCT GCTGGAGCGG 
GCGGTCTACG AGGTCAAGCG AGTGATCGTT GGCCAGGACC AGCTCGTGGA GCGGATCCTG
GTCGGCATGC TCGCGAAGGG CCACGTCCTG CTCGAGGGCG TGCCGGGCGT CGCCAAGACG
CTCGCGGTGG AGACGTTCGC GACGGTGGTC GGCGGGTCGT TCTCGCGCAT CCAGTTCACC
CCCGACCTGG TGCCGTCCGA CCTCGTCGGT ACTCGCATCT ACCGGCAGGG CAAGGAACAG
TTCGACACGG AGATCGGCCC GGTGTCGGCG AACTTCCTGC TCGCCGACGA GATCAACCGC
GCGCCCGCCA AGGTGCAGTC CGCCCTGCTC GAGGTGATGG CCGAACGCAA GGTGTCGATC
GGTGGCCAGA CCTTCCCGAT GCCCGACCCC TTCCTCGTGC TGGCCACGCA GAACCCGATC
GAGAACGAGG GTGTGTATCC GCTGCCCGAG GCGCAGCGCG ACCGGTTCCT GTTCAAGGTG
GTCGTGGGCT ATCCCTCCGT CGAGGAGGAG CGCGAGATCG TCTATCGCAT GGGCACCACG
CCGCCCACCG CCTCGCAGGT GCTCGACCCG GCGACGATCA TCCGGCTGCA ACGCGCGGCC
AGCGAGGTCT TCGTGCATCA CGCCCTCGTC GACTACGTGG TGCGGGTGAT CGCCGCGACC
CGAACCCCCC GCGAGTTCGG ACTCGACGAC GTCGCCTCCT GGATCACCTA CGGCGCGTCA
CCGCGTGCCA CCCTCGGCAT CGTCGCCGCG GCTCGTGCCC TGGCGCTGTT GCGCGGCCGC
GATTACGTGG TTCCGCAGGA CGTCGTCGAG ATCATCCCGG ACGTGCTGCG CCACCGCCTG
GTGATGAGCT ACGACGCCCT GGCCGACGAG GTGACCGCCG ATCAGGCCAT CACCCGCGTA
CTGCAGACGG TCGCGCTCCC TCAGGTCGTG GGCCAGTCGG TGCCGCAACA AGCGGCGCCG
ACCTACCCGC AGCAGCCGGC GGTGCAGCAG CAGCCCGCCG CGCAGCAGGC GACCCACCCG
CAGGGCTGA
 
Protein sequence
MTHSQGRDTA SSDEVKLLER AVYEVKRVIV GQDQLVERIL VGMLAKGHVL LEGVPGVAKT 
LAVETFATVV GGSFSRIQFT PDLVPSDLVG TRIYRQGKEQ FDTEIGPVSA NFLLADEINR
APAKVQSALL EVMAERKVSI GGQTFPMPDP FLVLATQNPI ENEGVYPLPE AQRDRFLFKV
VVGYPSVEEE REIVYRMGTT PPTASQVLDP ATIIRLQRAA SEVFVHHALV DYVVRVIAAT
RTPREFGLDD VASWITYGAS PRATLGIVAA ARALALLRGR DYVVPQDVVE IIPDVLRHRL
VMSYDALADE VTADQAITRV LQTVALPQVV GQSVPQQAAP TYPQQPAVQQ QPAAQQATHP
QG