Gene Tpau_2072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2072 
Symbol 
ID9156227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2160678 
End bp2161703 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content74% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003647023 
Protein GI296139780 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACG CCGTCGTGGT GCGCGGACTG TCGGTGCGGT ACGGCCGGAC CGCGGTGCTC 
CGGGACGTCG ATCTCACGGT GCGCCGCGGC GCCGTCACCG CGGTCGTGGG CCCGTCGGGC
TGCGGAAAGA CCACCCTGCT CCGGGCCATC GCGGGGCTGG AACGGGCCGT CGGCGGGAGT
ATCGAGATCG ACGGTGCGGT GGTCGCGGCA CCCGGGATCC ACGTTCCGCC CGACCGGAGG
AACGTGGGCC TCGTACCCCA GGAGGGCGCG CTGTTCGCCC ATTTGACGGT GCGGGGGAAC
GTGGGCTTCG GTCTGGGGCC CCGATGGCGG CGGACACCGG GCCGCGAGGA CCGCGTGACG
GGTCTGCTCA CCACGGTGGG CCTGGACGAG CTGGCCGACC GCCGTCCCGC GGAGCTGTCC
GGTGGACAGC AGCAACGGGT GGCGTTGGCG CGTGCACTCG CGCCGCGGCC CACGGTGATC
GGCCTGGACG AGCCCTTCTC GGCGCTCGAC GCCGCGCTAC GGAGCAGGCT GCGCGAGCAC
GTGAGCGCGA CCCTGCGCGC GGAGCAGGCG ACCGCACTGC TGGTGACGCA CGACGCGGAG
GAGGCGCTCG CGATGGCCGA CTCGATCGTG GTGCTGGTCG ACGGTGCCGT GCGCCAGGCC
GGTCCTGCGG AGCACGTCTA CACGTCACCG ATCGACGTGG GAGTCGCTCG TCTGTTCGGC
GAGGTCTCCG CTCTGCCCGG GACCGCGAGC GGCGATCACG TCGTGTGCGC ACTGGGCCGG
ATCCCACTGC GGCACAGTGC GACCGGACCC GTCGAGGTGC TCGCCCGCCC CGGTGAACTC
ACCCTCATCG CCGGCGGTGC GCATCGGGTC CGCAGCGTCG GATTCCGGGG GGAGCACTGC
GCCGTCACCG CCACCGTCGG CGAGACGAGG GTGCGGCTCG ACGTGCCGGT GTCCGAGGTC
CCGGAGCTCG GCGCCGCGGT CACGATCACG GCGGCGCGGC CCCTGCACGC CGTCGCCCCG
CGCTGA
 
Protein sequence
MNDAVVVRGL SVRYGRTAVL RDVDLTVRRG AVTAVVGPSG CGKTTLLRAI AGLERAVGGS 
IEIDGAVVAA PGIHVPPDRR NVGLVPQEGA LFAHLTVRGN VGFGLGPRWR RTPGREDRVT
GLLTTVGLDE LADRRPAELS GGQQQRVALA RALAPRPTVI GLDEPFSALD AALRSRLREH
VSATLRAEQA TALLVTHDAE EALAMADSIV VLVDGAVRQA GPAEHVYTSP IDVGVARLFG
EVSALPGTAS GDHVVCALGR IPLRHSATGP VEVLARPGEL TLIAGGAHRV RSVGFRGEHC
AVTATVGETR VRLDVPVSEV PELGAAVTIT AARPLHAVAP R