Gene Tpau_2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2062 
Symbol 
ID9156217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2147540 
End bp2148742 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003647013 
Protein GI296139770 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.279636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAACG CGACCCGAGA CAACCGAATC CGCAGGGCGC TCGTGGTGCC GGTCGCGCTG 
GCACCGCTCA TCGCGGTACC GGGCAACGTG GCCGCCGAGC CCACCACCCC GCCGCCGACA
CCGTCGACCG CCACTCCCGC ACCGACGACC ACGGCGCCGA CCACGACCCA GCCGCCCACC
ACGCGGCCGC CGGAACCCGG TTCGACGCGG CCCACCACGC CGCCCACCAC AACGAGCAGC
ACCGCGCCCC CGGCGTCGAC CACGACGCCG CCGGCACCGA ATCGGCTCAC CGTCGGGGCC
GTGCGGATCG TCGACGAGCA GGGCGCACCG GTTCCCGGTG CCACCGCGTT CGTGCAGGGG
TGCACCGGCG GACCGGGCGC CTCGCTCGCC GACGGGGGCG CCACCACCGT GACCGGTCCC
TGTGTGACCG CACGGATGGA ACGCGTGCCC ACGAATTGGC GGCTGCTCAC GCCGTCGACG
CTCACCGTCA CCACCAACGC CGGCCGGGCC GAGTTCCGGT TCGTACTCGC GCGAGGCGGG
ATCGTGCCGC CGACCAGCAC GCCGCAGCCC GGTGGCGTTC GGTTCACCCT GGACGCACGG
GACCGCAGCG GACGCGGCGT CGCCTCCCAG TACGCCGTGT ACGCCTGCGA GAGCGGACGA
CCGCTGGGCG GCCTGGCCAC GGACAGCGCC GGCAACGGTG GCGGTGCATT CCCGGGTGAC
TGCCTGACCG TGGTGCCGAC GGCGTGGCCG CGCGAGTGCG TACTCGTGGG CCCGCACATG
TACTCCCGCG TGGTGGGGAA CGGGGTGAAC CGGCTCAACT TCACGTTCAA GTGCGGCGGG
CAGAACCCGC CGGGACCCGC GGATGTACCC GGTGTGCTCG TGAAGACGGA CCGCATATCG
GGCGTCCCGT TGGCCGGCGC CTCGTTCGCG ATCTCCCAGT GCGAATCGGG CGAGACGATC
CGGGCGGTCT CCACTGGCGC TGACGGCAGG GCACCACTCG CGTTGCCTCC GGGCTGCTAC
CGGGCCACGG AGACCGTCGC CCCGTCGGGT TACCTCCGCG ACCCGGCCGC CGTGGCATTC
CGGGTGACTC CACCCGGTTT CGAGGTGCGG GTCACGAACG CAAGGATCTC CGCACCCGTC
GTTGTTCGTA ATCCCGCTGT TCGAGTGCCG ATCTCGTCGA TCCCTTCGGG GCGGGTGTGG
TGA
 
Protein sequence
MRNATRDNRI RRALVVPVAL APLIAVPGNV AAEPTTPPPT PSTATPAPTT TAPTTTQPPT 
TRPPEPGSTR PTTPPTTTSS TAPPASTTTP PAPNRLTVGA VRIVDEQGAP VPGATAFVQG
CTGGPGASLA DGGATTVTGP CVTARMERVP TNWRLLTPST LTVTTNAGRA EFRFVLARGG
IVPPTSTPQP GGVRFTLDAR DRSGRGVASQ YAVYACESGR PLGGLATDSA GNGGGAFPGD
CLTVVPTAWP RECVLVGPHM YSRVVGNGVN RLNFTFKCGG QNPPGPADVP GVLVKTDRIS
GVPLAGASFA ISQCESGETI RAVSTGADGR APLALPPGCY RATETVAPSG YLRDPAAVAF
RVTPPGFEVR VTNARISAPV VVRNPAVRVP ISSIPSGRVW