Gene Tpau_2032 details

Gene Information

• Locus tag: Tpau_2032
• ID: 9156187
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2118989
• End bp: 2119753
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 65%
• Product: transcriptional regulator, IclR family
• Protein accession: YP_003646983
• Protein GI: 296139740

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.716752
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGCGA AGACCACCAC CGGGGTGCAG TCGGTGGAGC GCGCCTTCGA GTTACTGGAG 
CTGATGGGAC GCGCAGGCGG GGAATGTTCT CTCAGTGAGC TGTCGGCGGG CACGCCGTTG 
CCGCCGCCGA CCATCCACCG CCTATTACGG ACACTGGTCG GTATCGGATA CGTCCGGCAG 
CTCCCCAATC GGCGATATGC CCTAGGTCCC AGGCTTATCC GGCTCGGAGA GGTTGCGAAT 
CGACAGCTGG GCGCTGTTGC GGTACCCGTT CTGGAAGCTC TCGTCGGTGA ACTCGAGGAG 
ACCGCTAGTC TCGCCGTGCT CGACGGTGAC ATGGTGATCT ACACGGGTCA GGTGCTCTCT 
CCGCACAACA TGAGGACCAA CAACGAGGCA GGCAGGCGCG TGAACCTGCA CAACAGCGGT 
GTCGGCAAGG CCGTTCTCGC CGAACTCGAT GACGCGCGAG TGGTCAAGCT CGTCTCCCAG 
GCCGGGATCA CCGCTCCCAC CCCGAACAGT GTGACCACGT TGTCGGGTGT CTTCGCCGAG 
GTCGAAAAGG TGCGCAGTCA GGGTTACGCC GTCGATGATG AGGAACAGGA ACTCGGCGTG 
CGGTGCTATG CGATGGCGGT GCCGGGAGCG CCGACCCCCA TGGCGGTCGG GATCTCCGGT 
CCGGTGTCAC GTCTGGGCGA CGATTTCATC GATCGCGCCG TGCCCGCCCT TGAGCACGCC 
ACCCGCGTGA TCTCGGACGC CCTCATCGGT TCTCGCGAGA GCTGA 

 

Protein sequence

MAAKTTTGVQ SVERAFELLE LMGRAGGECS LSELSAGTPL PPPTIHRLLR TLVGIGYVRQ 
LPNRRYALGP RLIRLGEVAN RQLGAVAVPV LEALVGELEE TASLAVLDGD MVIYTGQVLS 
PHNMRTNNEA GRRVNLHNSG VGKAVLAELD DARVVKLVSQ AGITAPTPNS VTTLSGVFAE 
VEKVRSQGYA VDDEEQELGV RCYAMAVPGA PTPMAVGISG PVSRLGDDFI DRAVPALEHA 
TRVISDALIG SRES