Gene Tpau_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2020 
Symbol 
ID9156175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2105862 
End bp2106293 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003646971 
Protein GI296139728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.206011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGAGC AACAGCGGAT TCGCGACCTC GCCGTGCTAC GGCGCGTGCG GGACCGGATC 
GACCGGGAGT TCGCGCAACC GCTCAACGTC GAGGAACTCG CCCGGGGCGC GCACATGTCC
GCGGGCCACC TGAGCCGAGA GTTCAAACGG GTCTACGGCG AATCCCCTTA CTCGTACTTG
ATGACCCGCC GGATCGAGCG CGCCATGATG CTGCTGCGGC GAGGCGACGT CTCCGTCACC
GACGCCTGCT TCGCCGTCGG CAGCTCGTCG CTCGGGACCT TCAGCACACG ATTCACCGAA
CTCGTCGGTG TTGCGCCCAG TGTCTACAAG CGCGACCACG GCGCGGCGGC GCAGGGCATT
CCCGCGTGCC TCGCGCGCCA GATCACCAGA CCGATCAGGA ATCGAGAAGC ACCTCCGGAC
ACGCCCGTCT AG
 
Protein sequence
MSEQQRIRDL AVLRRVRDRI DREFAQPLNV EELARGAHMS AGHLSREFKR VYGESPYSYL 
MTRRIERAMM LLRRGDVSVT DACFAVGSSS LGTFSTRFTE LVGVAPSVYK RDHGAAAQGI
PACLARQITR PIRNREAPPD TPV