Gene Tpau_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2018 
Symbol 
ID9156173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2104344 
End bp2105390 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content64% 
IMG OID 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_003646969 
Protein GI296139726 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACCA TGATCGTCAA CGCATATGGA GCCGTGTCCG CCACTGAACC CCTGGCCCCG 
ATGACCGTCG AACGGCGGGA TCCCGGACCG CACGACGTGC AGATCGCGAT CCGCTACGCC
GGCATCTGCC ACAGCGATAT CCACACGGTA CGCAGCGAGT GGGGCCCCGC CCGTTACCCC
GTGGTGCCTG GTCACGAGAT CGTCGGCGAG GTCACCGCGG TCGGCACCGA GGTCACGAAG
TTCGGCGTCG GCGACCGGGT GGGCGTCGGC TGTTTCGTGG ACTCCTGCCG CGAGTGTGCC
GCGTGCAAAG CAGGCGAGGA GCAGTACTGC GAGCGCGGGA TGACCGGTAC CTACAACGCC
AAGGGCCGCG ACGGTCAGCC CACCCAGGGC GGCTACTCGC AGTCCATCGT GGTGGACGAG
AACTATGTGC TGCGGGTACC CGAGAGCATC GATTACGCAG CCGCCGCACC GTTGTTGTGC
GCGGGTATCA CGCTGTTCAG CCCGCTGCGT CATTGGAATG TGGGCCCGGG TACCAGGGTC
GCGATCATCG GTCTCGGTGG ACTCGGCCAC ATGGGCGTGA AGATCGCGGC GGCCATGGGT
GCCGAGGTCA CCGTGCTCAG CCAGTCACTG AAGAAGATGG AGGACGGACT GCGACTCGGA
GCCCAGCACT ACTACGCCAC CTCCGACCCC GATACTTTCA CGTTGCTGCG CAACCGGTTT
GACATCATCA TCAACACGGT GTCGGCGAAC CTGGACATGC ACCAGTACTT CAACCTGCTC
GCGGTCGACG GCACGCTTGT CGAGGTGGGA CTGCCCGAGC ATCCGGTCCC GGTCAATGTC
TTCGACCTCA CTCGCAACCG GCGTAGCTTC GCCGGATCGA TGATCGGCGG CATCGCGCAG
ACCCAGGAAA TGCTCGATTT CTGCGCCGAG CACGACATCG CCTCGGAGAT CGAGCTGATC
TCCGCCGACC AGATCAACGA GGCGTATGAG CGCGTGATCG CCTCGGATGT GCGGTATCGC
TTCGTGATCG ACACCGCCAC ACTCTGA
 
Protein sequence
METMIVNAYG AVSATEPLAP MTVERRDPGP HDVQIAIRYA GICHSDIHTV RSEWGPARYP 
VVPGHEIVGE VTAVGTEVTK FGVGDRVGVG CFVDSCRECA ACKAGEEQYC ERGMTGTYNA
KGRDGQPTQG GYSQSIVVDE NYVLRVPESI DYAAAAPLLC AGITLFSPLR HWNVGPGTRV
AIIGLGGLGH MGVKIAAAMG AEVTVLSQSL KKMEDGLRLG AQHYYATSDP DTFTLLRNRF
DIIINTVSAN LDMHQYFNLL AVDGTLVEVG LPEHPVPVNV FDLTRNRRSF AGSMIGGIAQ
TQEMLDFCAE HDIASEIELI SADQINEAYE RVIASDVRYR FVIDTATL