Gene Tpau_2017 details

Gene Information

• Locus tag: Tpau_2017
• ID: 9156172
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 2103547
• End bp: 2104245
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 67%
• Product: protein of unknown function DUF1345
• Protein accession: YP_003646968
• Protein GI: 296139725

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGAACG ATGCAAGTGC AACCGACTCG GAGAGCAGCC GGCCGGTAGT GGCCCAGCGA 
CGTGCCGCGG TAGCCCGGAT CCGCGCCACC GTGATGATCC TGGTGGGCGG TGGCGTCGCG 
GTCGCGGTCG GCGTACTCGA TTCCTGGCGT CACGCACCGG CTGCCGGGTG GGCCGCCGCC 
GCCGGGATCT ACGTCGTCTG GGTGTGGGTC ACCATCTCGC CGATGGACGC CGAGACCACG 
GCCGCCCACG CCACTGAAGA GGACCCGCAA CGACGCCTCG CCAACTTCCT CACCACTACC 
TGTGCGCTGG CCAGCCTCAT CGCCGTCGCG ATCGTCATGG CGGACGCGCA CACCGCGACA 
CCCGGCGGTC GGCTCGCGCT CGGTGGTCTC GCCCTCAGTA CCACCATCCT GTCCTGGCTG 
ATGATGCACC TGCTGTTCAC GCTGCGGTAC GCGGAGACCT ATTACGACAC ACCTCCGCCC 
GGGGGCATCG ACTTCAACCA GACGGACCCG CCCCGGTACA CCGACTTCGC CTACATCTCG 
CTGTCCTTCG GCACCGCCTA CTGCGTCTCC GACACGGCGA TCACCTCCAG TGCCGTCCGC 
GCCGAAACAC TGAGGCACAC GCTGCTCTCC TTCGTCTTCG CGAACGGGAT CCTTGCCACC 
ACCATCAACC TGGTGGTGAG CCTGGCCAGC AGCAACTGA 

 

Protein sequence

MSNDASATDS ESSRPVVAQR RAAVARIRAT VMILVGGGVA VAVGVLDSWR HAPAAGWAAA 
AGIYVVWVWV TISPMDAETT AAHATEEDPQ RRLANFLTTT CALASLIAVA IVMADAHTAT 
PGGRLALGGL ALSTTILSWL MMHLLFTLRY AETYYDTPPP GGIDFNQTDP PRYTDFAYIS 
LSFGTAYCVS DTAITSSAVR AETLRHTLLS FVFANGILAT TINLVVSLAS SN