Gene Tpau_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2009 
Symbol 
ID9156164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp2096530 
End bp2097234 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content67% 
IMG OID 
ProductNUDIX hydrolase 
Protein accessionYP_003646960 
Protein GI296139717 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.509117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGATG GTAGCACCGG ATCGGCGGAA CCCGCGATCG CTCACGAAGT GCTGAGTGTC 
GTCTTCCGCG TCGCCGCAGG ACAGGTGCAC GTGCTGTTGT GGCAACGCGC CATGGATCCG 
TACTCCGGAG CATGGGCGCT GCCGGGCGGT GCGCTGCGAT TCGACGAGGA CCTGCCCACG 
TCGGCCCGGC GTCAGCTCGC CGAGAAGGTG GACGTGACCG ATGTGGCCCA CCTCGAACAA 
TTCGGAGAGT TCTCCGATCC CCACCGGGTT CCGGCGACCC CTTCCTCCGC ACGCACGATC 
GCATCGGTCT TCCTCGGGCT GGTGCGCACC GACACCAACC CACGACTGCC CGACGACACC 
GATTGGCACG ACCTGGACAG CCTGCCCGAA ATGGCCTTCG ATCACGCCGT GATGGTGCAC 
CGGGCGAGAG CCCGGGTCGC GGCACGCCTG TCCTACTCCA ATATCGGATT CGCCCTCGCT 
CCGCGCGAAT TCCCCGTCTC GGAGCTGCGC GACATCTACG TCGCGGTGCT GGGATACCCG 
GTGGACGCGA CGAACCTACT GCGGATTCTG TCGCGCCGTT CGGTGATCAC CGCCACCGGA 
GGCACGGCAC GCTCAGGACG CGGACGTCCT CCGGCGTTGT ACCGGTTCAC CGACTCCTAC 
CTGCGGATCA CCGACGAGTT CGCCACGCTG CGGCCGCCGG GCTGA
 
Protein sequence
MPDGSTGSAE PAIAHEVLSV VFRVAAGQVH VLLWQRAMDP YSGAWALPGG ALRFDEDLPT 
SARRQLAEKV DVTDVAHLEQ FGEFSDPHRV PATPSSARTI ASVFLGLVRT DTNPRLPDDT 
DWHDLDSLPE MAFDHAVMVH RARARVAARL SYSNIGFALA PREFPVSELR DIYVAVLGYP 
VDATNLLRIL SRRSVITATG GTARSGRGRP PALYRFTDSY LRITDEFATL RPPG