| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1988 |
|---|
| Symbol | |
|---|
| ID | 9156143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 2077581 |
|---|
| End bp | 2078531 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_003646939 |
|---|
| Protein GI | 296139696 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACAA CGATCCTCCC GCCGCCGAGT CCGGCACTCG ACGCGGCACC GACGCAGGTC
CGGCTGGTGG GCCGCCGACG CCCGGGCCGG TGGGTCACCA CCGCCGCCGT CGCCGTCGTC
GCGGCGATGC TCGTGCACAC CCTGATCACC AACGAGCGTT TCGAATGGCC AACGGTGGCA
CACTATTTCA CACAGGAGTC CATCCTCGAG GGACTCGGAC TCACGCTGTG GCTGACAGCC
GTCACGTTCA CGGCCGGTTT CGTCCTCGGA ATCGGCCTGG CGGCGATGCG GTTGTGGGGC
GGGCCCCTGC TGCAGTCGGT GTCGTTCGGG TTCGTGTGGA TCGTCCGCTC GGTACCCCCG
CTCGTGCTCC TGCTCTTCTG GTTCCAGCTC GCCTCGCTCT ACCCGCAACT GTCACTGGGC
ATTCCGTTCG GACCGGAGTT CGTCACGTTC AACACCACGC ACCTGATCGC ACCGCTGGTG
GCGGCATTCA TCGCGCTCAC CCTGGACGTA GCCGCGTTCG CCGCCGAGAT CGTCCGCGGC
GGGCTGGTTT CCGTCGATCC CGGACAGACC GAGGCGGCAC GCTCTCTCGG CCTGAATCCG
CGGCGCATCT TCCGACGGAT CGTGCTCCCC CAGGCGATGC CCGCGATCAT CCCCTCGTCC
GGGAACCTCC TGATCGGTTT GCTCAAGTCG ACGTCCTTGG TGAGCGTCAT CGCGGTGACC
GATCTGCTGT ACTCGGTACA GCTGATCTAC AACCAGAACT TCAAGGTGAT GCCGCTGCTC
CTGGTCGCGA CCATCTGGTA CATCGTGATC ACCTCAGTCC TCGCCATCGG CCAGTACTTC
GTCGAGCGCC GGTTCCAGCG CGGGCGTCGC GACGCCCGGC CGTTCCGGGA GATCCTCCGG
GATGCGGCCC GGCTCCGTCC ACACCTTCCC GCGATCGGGG CGCGCGCATG A
|
|---|
| Protein sequence | MATTILPPPS PALDAAPTQV RLVGRRRPGR WVTTAAVAVV AAMLVHTLIT NERFEWPTVA
HYFTQESILE GLGLTLWLTA VTFTAGFVLG IGLAAMRLWG GPLLQSVSFG FVWIVRSVPP
LVLLLFWFQL ASLYPQLSLG IPFGPEFVTF NTTHLIAPLV AAFIALTLDV AAFAAEIVRG
GLVSVDPGQT EAARSLGLNP RRIFRRIVLP QAMPAIIPSS GNLLIGLLKS TSLVSVIAVT
DLLYSVQLIY NQNFKVMPLL LVATIWYIVI TSVLAIGQYF VERRFQRGRR DARPFREILR
DAARLRPHLP AIGARA
|
|---|
| |