Gene Tpau_1987 details

Gene Information

• Locus tag: Tpau_1987
• ID: 9156142
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 2076814
• End bp: 2077584
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 67%
• Product: ABC transporter related protein
• Protein accession: YP_003646938
• Protein GI: 296139695

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCCA TCGAGATCCG CGGACTCACC AAGTCCTTCG GCGCACGCGA GGTGCTCCGC 
GGCATCGATC TCGACGTGCA GGCCGGCGAG GTCGCGATCA TTCTCGGCCC GTCGGGGTCA 
GGCAAATCAA CTCTGCTGCG CTGCATCAAC CACCTGGAGC GACCCGATTC CGGCGTCGTC 
CGAGTGGGCG GTGATCTGAT CGGTTACCGG GAAGCGGGCC GCCGCGGCGA TGTCACAGTG 
CTGCGGGAAC TGCACCCCCG CGACGTGGCG CGTCAGCGAG GACGCATCGG TATGGTGTTC 
CAGCAGTTCA ATCTGTTTCC GCACTTCACG GTCTTGCAGA ATCTGACCGA GGGACCGGTC 
GCCGCCGGGA TCCCCGCTGA CGAGGCCGCC GATCACGGCC GCGAGCTGCT GCACCGAGTC 
GGCCTGACCG GGCGGGAGGA CACCTACCCC GCGCACCTGT CCGGCGGTCA GCAGCAGCGC 
GTCGCGATCG CTCGCACTCT CGCCATGCGA CCCGACGTCG TGCTGTTCGG CGAGCCCACC 
TCGGCGCTCG ATCCCGAACT CGTGGGCGAG GTGCTCGCCG TGATCCGCGA TCTCGCCGCA 
ACCGGGATGA CGATGGTGGT GGTGACGCAC GAAATCGGCT TCGCCCGCGA CGTCGCCGAC 
ACCGTGATCT TCATGGACGA CGGACAGATC GTCGAATCCG GCACCCCTGA AACGATCTTC 
GGTGAAGCCG AGCACGACCG CACCCGCGAG TTCCTCGCAG CGGTGCGCTG A 

 

Protein sequence

MSAIEIRGLT KSFGAREVLR GIDLDVQAGE VAIILGPSGS GKSTLLRCIN HLERPDSGVV 
RVGGDLIGYR EAGRRGDVTV LRELHPRDVA RQRGRIGMVF QQFNLFPHFT VLQNLTEGPV 
AAGIPADEAA DHGRELLHRV GLTGREDTYP AHLSGGQQQR VAIARTLAMR PDVVLFGEPT 
SALDPELVGE VLAVIRDLAA TGMTMVVVTH EIGFARDVAD TVIFMDDGQI VESGTPETIF 
GEAEHDRTRE FLAAVR