| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1971 |
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| Symbol | |
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| ID | 9156126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 2059008 |
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| End bp | 2060585 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003646922 |
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| Protein GI | 296139679 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.743088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGCG CCCGCCGCAC CGTCGGCCTC ATTACAGCAG TAGCACTGGC ACTCGGCGCG
TGCTCGTCGG GCGCGGGCGG CGCGGAGGAC CGCCTGGTAC TCGCCGAGAC TCAGCCGCTG
GGCGGATTCA ACCCACTGAT GGGGTACGGC GAACTGGGCG TGTCCCCTTT GTACGAGGGC
CTGTACCGGC CGGATGCGGC GTCGGACGGG CAGGTGCCGG ATCTTCTGCC GGCACTCGCC
ACCGCGGCGC CGCAGCGGAT CGGCCCCCGC ACCTGGCGGA TCCCGCTACG GGCCGGAGTC
ACCTTCTCCG ACGGGACACC GTTCGACGCC GCTGATGTGG TTGCGACCTA CCGCGCGGCG
CGCGATCCAA AGGTGGCGGC CGACATCGCC ACCCACGTGG CGCCGGTGCA GGACGTGACC
CCGGACGGCG GCGGCGCCGT CATAGTGCGG CTCGCCACCG ACGGTGATCC GACTCCCTAT
CTGCTCCTCG GCATCGTGCC CGCCGAGCGC ATCGAGGAGC GTCCGGTCGC CCAGTGGGGC
CTTAATCGCA CGCCCGTCGG CACCGGGCCG TACCGGCTCG ACTCCCTCGC CGATGACCAG
GCCGTCCTCG TGGCCCGTTC CGATCGCGGC CCGCAGCCGG CGGTGCGCCG CGTGGTGTAC
ACGCTGGTGC CGGACGACAA TGCCCGGGCA CAACGGGTAC GGGCCGGCGA GGTCGACGGT
GCGCTGCTGC CGCCGAAGCT GGCGGCGTCC CTCGACGGCC GTGACGGCGT GCGCACCATG
ACGGTGAAAT CGGCGGACTG GCGCGGTGTC TCGCTCCCCG CCGCCAATGC GTTCACCGCC
GATCCGGTGG CGCGGCGTGC GATGAACCTG GGCGTGGATC GCGCCGCGGT GATCTCCGGG
GTGTTGGCCG GCGCCGGGGA ACCGGCGAGC ACGCCGTACT CGTCGGTGTA CGGCGCCGCA
TACGAACCGG GAGCGCAGTT CGACTTCGAC GCTGCGGAAG CGAGTCGACT GCTCGATGAG
GCAGGGTGGC TACCCGGACC GGACGGGGTG CGCACGCGCA ACGGCAGCAC CGCCGCGTTC
GGGCTGCTCT ACAACGCACA GGACACGGTG CGGCGCGACC TGGCCGTGGC CTTCGCCGCG
GCGATGAAGC CGCTCGGTAT CGCCGTCACA CCGCAGGGCA GCAGCTGGGA CGAGATCGAA
AAGCGCACCC GCGATGCCGC GATCCTGCTG GGCGGCGGCG AGACGCCGTT CAGCATCGAC
GCGCAGGGCT ACGACGCCCT GCACACCCGG GTGCCCGGCT CGTCGCCCTA CAGCAATCCC
GGAGACTTCA CCGCGCCCGG ACTCGATGAT CTGCTGGAGC GGGCCCGGAA CCTGACTCCC
GGTCCCGAGA AGGACGCCGC GTACCGGCAG GTGCAGCGCA TCTACGCCGC CCAACCCTCG
GCCGTCTACC TCGCGCACCT GCACCACGCG TACGCCGTCC GGGCCGGCGG CTGGACCTAC
GCTCCGCCGA TCCTGGAACC GCATTCGCAC GGCGTCACGT GGGGACCGTG GTGGAACCTG
CCCTCGTGGA AACGCTGA
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| Protein sequence | MRSARRTVGL ITAVALALGA CSSGAGGAED RLVLAETQPL GGFNPLMGYG ELGVSPLYEG
LYRPDAASDG QVPDLLPALA TAAPQRIGPR TWRIPLRAGV TFSDGTPFDA ADVVATYRAA
RDPKVAADIA THVAPVQDVT PDGGGAVIVR LATDGDPTPY LLLGIVPAER IEERPVAQWG
LNRTPVGTGP YRLDSLADDQ AVLVARSDRG PQPAVRRVVY TLVPDDNARA QRVRAGEVDG
ALLPPKLAAS LDGRDGVRTM TVKSADWRGV SLPAANAFTA DPVARRAMNL GVDRAAVISG
VLAGAGEPAS TPYSSVYGAA YEPGAQFDFD AAEASRLLDE AGWLPGPDGV RTRNGSTAAF
GLLYNAQDTV RRDLAVAFAA AMKPLGIAVT PQGSSWDEIE KRTRDAAILL GGGETPFSID
AQGYDALHTR VPGSSPYSNP GDFTAPGLDD LLERARNLTP GPEKDAAYRQ VQRIYAAQPS
AVYLAHLHHA YAVRAGGWTY APPILEPHSH GVTWGPWWNL PSWKR
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