| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1965 |
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| Symbol | |
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| ID | 9156120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 2052531 |
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| End bp | 2054987 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | protein of unknown function DUF404 |
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| Protein accession | YP_003646916 |
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| Protein GI | 296139673 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.206535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGTCG ACGGACTACA GGATCTCGAC GCCGATGCCC TCGCCCGGTT GCAGGCACGG
GTACGGGGCC TGATCGATGA CGAGGGCATC ACCTACAACG CACTCGACGC GTTACCGAGT
GACCTCGCCG CACCGGCCAC CACCGGGCGG TGGCGACTCG ATCCGTTGCC GGTGCTGCTG
AGTACCGACG AGTGGGAACC CCTGGCGCGC GGCGCCGCCC AGCGGTCGAC GCTGCTCGAC
GCGCTGCTCC GCGACTTCTA CGGCGAACAG CGCACCATCC GCGACGGCCT GCTGCCCCCC
GAGGTGCTGT TCGCCCACCC CGGTTTCATC CGCCGGGCCT TCGGTGTTCC CGCGCCCGGG
ACCAAGGCGT TGTTCCTGCA CGCCGCTGAC GTCGGCCGGA TCGGAGCCGG CGGCGCGTAC
GCGGTGGCCG CCGACCGCAC CCAGGCGCCG TCGGGCGTGG GCTACGCCCT CGCGGACCGG
CGGGTCACCT CCCGCGCCCT GCCCCGCGAA TTCCGCTCCG AGACACCGCG ACCGGTGTCG
TCGTTCGCCG CCGCGCTGCG GGGGCAACTG CTCGAGAGCG CTCCACCCGG GGTCGACGAT
CCCACGGTGG TGGTGCTCAG TCCCGGATCG TTCTCCGAGA CGGCGTTCGA CCAGGCCTAC
CTCGCCTCCG TGCTCGGATT CCCGCTGGTC GAGGCCTCCG ACCTCACCGT CCGCGACGGT
GGTGTGTACA TGCGCGCACT CGGCCGAATG AAACGCGTCG ACGTGGTGCT GCGCCGTGTC
GACTCCGAGT TCTCCGACCC GCTCGATCTG CGCACCGACT CCCGGCTCGG TGTGGTCGGC
CTGGTCGAGA TGATGACCCG CGGGGCCGTC ACCGTGGTGA ACACACTCGG CTCCGGCGTT
CTGGAGAACC CGGCCCTGCA CGCCTACCTG CCGCAGTTGT GCCGCGCCCT GCTCGATGAG
GACCTGTTGC TCGACTCCAC CCCGACCGTG CACGCGGCCA CTCCCGCCGG TCGCGCCGTG
ATCGACGGCG CACTCGACGA TCAGTTGCTG ATCGATTTCT CCACCGGGGA GCGGATCCTG
GGCGCCGACC TCACCGCCGA GGCCGCCGCG GCACTGCGCG CCCGCATAGC CGAGCAGCCC
GCGCTGTGGT GCGCGAAGGA ACTGGTGCCC TTCGACACCG AGCCCGCTCT GTCCGACGGT
GCCGTGCTGG ACCGCGGATT CTCCCTGCGG GTCTTCTCGC TGGCGCAGGA GGCCGGCTAC
ACCGTGCTCG GTGGCGGCCT CGGCCAGGTC CTCCTCGACG GTGCCGCCGG CGCGCAACTG
CATACATCGG CGGCCCGTGA CGTCTGGGTG CCCGCGGGGG AGGACAGCCG CGGATCGATC
CGCGTGGCGA CCTCTCCGCG CGTGGCCAGG ATGAACGGCG TCACGGCGAG CGGACCCGTC
GCCACCCCGC GCGTCCTGTC CGACCTGTTC TGGATCGGCC GGTACGCAGA ACGCGCGGAG
GCGATGGTGC GGCTGCTCAG TGTGGCCCGC GAACGCGATC AGGAGTTCCG GCACCGGCCC
TGGCAGCCCG GGGCCGCCTC CCTGCAGCCC CTGCTCGACG CCGTCGTCGA GGTGTCCGAT
ACCGGGCAAC TCGGACCGAT CGTGGCCGAG GGCGCCGACC AGTCCGATGT GCTCGCCCGA
TTGCGTCGAC TCACCCTCGA CACCGACCTG CCCGGCACCG TCGCCTTCGC CGGCGTGCGC
CTGCGCGCCT GCCTGCGCGC GGTCCGGGAT CAGATGTCGA CCGACACCTG GCTCGTGCTC
AGCGGCGCCG AGCGCTCGCT GGGCCGGCTC GCCGCCGACC GGCACGACGG GGGCGAGCAA
CTCGACCAGA CCCTCGGCGA GGTGCTGGTC TCGCTGCTCG CCTTCGCCGG ACTCGCCCGT
GAATCGCTGG TCCAAGATCC AGGATGGCGC ATGATGGACG CCGGGCGGCG GATCGAGCGG
GCCCTGCAGT TGGCCGACCT GACCACATCC ACCGTGGTCC CGGCCCGAGA ATCCGAGGTC
GAGACAGGCC TGCTCGACGC GTACCTCGTG GCCTGTGAGT CGTCGGTCAC CTATCGGCGG
CGGCACCGGT CGGTACTGCG TGCGGGCGCC GTGGTCGACC TGATGTTCCT CGACGCCGAC
AATCCACGGT CGATGGTCTT CCAGCTCGAC TCGCTCTCGC GCGACCTGCA GAACCTGCCG
GACGAGATGC GCAGCGTGGC CGCCGAACGC ACCGCCACCG AACTACTGGG CCGGCTGCGC
CGGTTCGACC CCGAGGAGGC CGAGACCGTG ACCGACGGTG TCCGCACCGA ACTCGTCGCA
CTGATCGATG CCATCACCGG TGGCCTGCGC GATATCTCAG ACGTGCTTGA GCGGACCCGT
TTCGCGCTGC CCGCCGAGGC TCGTCCGATC TGGGTCGGGG TGCCGTCGTG GGCCTGA
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| Protein sequence | MTVDGLQDLD ADALARLQAR VRGLIDDEGI TYNALDALPS DLAAPATTGR WRLDPLPVLL
STDEWEPLAR GAAQRSTLLD ALLRDFYGEQ RTIRDGLLPP EVLFAHPGFI RRAFGVPAPG
TKALFLHAAD VGRIGAGGAY AVAADRTQAP SGVGYALADR RVTSRALPRE FRSETPRPVS
SFAAALRGQL LESAPPGVDD PTVVVLSPGS FSETAFDQAY LASVLGFPLV EASDLTVRDG
GVYMRALGRM KRVDVVLRRV DSEFSDPLDL RTDSRLGVVG LVEMMTRGAV TVVNTLGSGV
LENPALHAYL PQLCRALLDE DLLLDSTPTV HAATPAGRAV IDGALDDQLL IDFSTGERIL
GADLTAEAAA ALRARIAEQP ALWCAKELVP FDTEPALSDG AVLDRGFSLR VFSLAQEAGY
TVLGGGLGQV LLDGAAGAQL HTSAARDVWV PAGEDSRGSI RVATSPRVAR MNGVTASGPV
ATPRVLSDLF WIGRYAERAE AMVRLLSVAR ERDQEFRHRP WQPGAASLQP LLDAVVEVSD
TGQLGPIVAE GADQSDVLAR LRRLTLDTDL PGTVAFAGVR LRACLRAVRD QMSTDTWLVL
SGAERSLGRL AADRHDGGEQ LDQTLGEVLV SLLAFAGLAR ESLVQDPGWR MMDAGRRIER
ALQLADLTTS TVVPARESEV ETGLLDAYLV ACESSVTYRR RHRSVLRAGA VVDLMFLDAD
NPRSMVFQLD SLSRDLQNLP DEMRSVAAER TATELLGRLR RFDPEEAETV TDGVRTELVA
LIDAITGGLR DISDVLERTR FALPAEARPI WVGVPSWA
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