| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1960 |
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| Symbol | |
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| ID | 9156115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 2046591 |
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| End bp | 2048219 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | protein of unknown function DUF885 |
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| Protein accession | YP_003646911 |
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| Protein GI | 296139668 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.381078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCGC CGATCGATGA CCTCGCCGAC CGCTTCGCCC AGGAACTCGC CGCGGCGGAT
CCGGTGGAGG CGACCGCGGT CGGGGTCACG GACTTCGACG ACCGGCTCAC GGACTACTCC
CCCGGGGGCA TTCGGGCCCG GATCGATCTG GCCCGCACCA CGCTCGCGGA ACTGGCCGCA
CTCACACCGG AGTCCGATGC CGACCGGGTG ACCGCCGATG CACTGCGTGA ACGCCTCGGT
GTGCAGATCG AACTGGCCGA CGCCGGACGG ATCGTGGGCG ACCTCAACGT GATCGCCTCA
CCGCTCCAAG GCATCCGCGA TGTCTTCGAC CTGATGGGTA CCGGCACCGA CGAGGCGGAT
GCCCTCCTCG TCGCGCGTCT GTCCGCGGTG CCCGCCGCCG TCGACTCGGC CATCTCGGGT
CTGCGGGCCC GGCTCACCGA CGGTTCGTGG CCGTTCGCCG CTCTTCAGGT CACCGAGTGC
CTCACCCAGG CCCGCGAAGC GGGAGAGCAA GTCGCGGCGA ACGCCGACCG GCTCAGCGGA
CCGATTCCGG ACGGCCTCGT CGAGGCCATC CACGCGGCGT TCGCCAGGTT CGCCACGGTG
CTCTCCGACG AGATCGCGCC GTCGGCGGTG CCGGTGGATC GTTCGGGCGG TCTGGGAGTG
GGGCGCGAGG CCTATCCGCT GTACTCGCGG CTGTTCCTGG GCACCAATGT CGATCTGGAG
GAGACGTACG CCTGGGGGCA GCAGCTGCTG GCGTCGATCG TCGCCGAACA GCACGAGGTC
GCGCAGCGGC TGTACCCGGG ATCGACGGTG GCGGAGGCGA TCACGCGCCT GGACACCGAG
CCGCGGTACG CACTGCACGG CACCGATGCA CTCCAGGCAT GGATGCAGCG GACCTCGGAC
GAGTCGGTCG CCGCCCTGGC GGGCACACAC TTCGATATCC CGGCGCCGCT GCATCACTTG
GACTGCCGGA TCGCGCCGAG CAGCAGCGGC GGCATCTACT ACACCGGACC CTCGGCCGAC
CTGACTCGTC CGGGTTCGAT GTGGTGGTCG GTTCCGAAGG GCGTCACCGA GTTCCACACC
TGGCAGGAGA AGACCACCGT CTACCACGAA GGTGTCCCGG GACACCACCT GCAGATCGGG
CAGGCCGTGA TCGCGCCGCT GAACCGCTGG CGCAAGCTGT ACTCGTTCAC CTCGGGACAC
GGTGAGGGCT GGGCGCTGTA CGCGGAACGA CTCATGCGGG ATCTCGGCTT CCTCGACGAC
GACGGCGACC TCATGGGCAT GCTCGACTCG CAGCGGCTGC GCGCGGCGCG AGTGGTGCTC
GACATCGGTG TGCACTGCGG CTTCGAGGCG CCCGCCGAGG TGGGTGGAGG CGCGTGGACG
TACGAGAAGG GCTGGGCCTT CCTGCGCTCG CACGTCGCCA TGTCCGACGA GCAGCTCCGG
TTCGAGTACC ACCGATACCT GGGCTGGCCC GGCCAGGCAC CGTCGTACTC GGTGGGACAG
CGGGTATGGG AGCAGACCCG CGACGCCTAC CTCGCGGCGC ACCCGGGATC GTCGGTCAAG
GACTTCCACC GGGACGCCCT CGCCCTGGGC GGCATGGGTC TGGACACCCT GCGCGCCGCG
ATCGCCTGA
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| Protein sequence | MTSPIDDLAD RFAQELAAAD PVEATAVGVT DFDDRLTDYS PGGIRARIDL ARTTLAELAA
LTPESDADRV TADALRERLG VQIELADAGR IVGDLNVIAS PLQGIRDVFD LMGTGTDEAD
ALLVARLSAV PAAVDSAISG LRARLTDGSW PFAALQVTEC LTQAREAGEQ VAANADRLSG
PIPDGLVEAI HAAFARFATV LSDEIAPSAV PVDRSGGLGV GREAYPLYSR LFLGTNVDLE
ETYAWGQQLL ASIVAEQHEV AQRLYPGSTV AEAITRLDTE PRYALHGTDA LQAWMQRTSD
ESVAALAGTH FDIPAPLHHL DCRIAPSSSG GIYYTGPSAD LTRPGSMWWS VPKGVTEFHT
WQEKTTVYHE GVPGHHLQIG QAVIAPLNRW RKLYSFTSGH GEGWALYAER LMRDLGFLDD
DGDLMGMLDS QRLRAARVVL DIGVHCGFEA PAEVGGGAWT YEKGWAFLRS HVAMSDEQLR
FEYHRYLGWP GQAPSYSVGQ RVWEQTRDAY LAAHPGSSVK DFHRDALALG GMGLDTLRAA
IA
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