Gene Tpau_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1958 
Symbol 
ID9156113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2044110 
End bp2045705 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content71% 
IMG OID 
ProductAlkylglycerone-phosphate synthase 
Protein accessionYP_003646909 
Protein GI296139666 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.778758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCCT CCGAGGTGGA GCTTCCCGTC GTCGCTTTCG AGCCCGGTCG CTGGGGAGAT 
CCGGCCACGC CGATGCACCT GTCCGATTCG GTGCTCGGCG CGCTGACCAT GCTCGGCATC
GATGGGGCGC CGCCCGAGCC GATCACACCC GTGGTGGCCG CGAGCCGGGC CGATGAATCC
GCGGTCACCG CATTGCGCGC CACCGGTGCG GACGTCTCCA CCGATCAGGC CGACCGGCTA
CGGCACCTGC GCGGCTACTC GACCCCCGAT CTGCTGAGGT TTCGTACGGG CGACGCCTCC
GACGCCCCTG ATGTGGTGGT CACTGCGCGC ACGGCCGACC AGGTGACCGC TGTTCTGCGG
GTGTGCGGCG AGGCCGGGTT CACGCTCAGC CCGTTCGCGG GAGGTACCGC CGTCACCGGC
GGACTCGCCC CGGAACGTAC GCGCCCGGTC GTCGCGCTCG ACCTGCGTGG TCTCACCGGC
CTGCTCGACC TCGACTCCGT CTCGCAGGTC GCCACGCTCG CCGCCGGAAC CCGGCTGCCC
GAGGCGGAGA AGCTCTTGCG CGAGCGAGGC TTCGAGCTCG GTCACTTCCC CCAGTCCTAC
GAGGGCGCGA CCATCGGCGG CTGTGCAGTC ACCCGATCCG CCGGGCAGTC CTCGATCGGC
TACGGCCGCT TCGACGAGAT GGTCGTCGGG CTCACCGTCG CCACCCCGGT GGGCACCAGC
GAGATCGGCA CCGCACCCAA GTCTGCCGCC GGCCCCGACC TGCGCCAGCT GTTCCTCGGC
TCCGAGGGGG TGTTCGGCGT GGTCACCGCC GTGCGTGTCC GGGTGCACCC CGTGCCGGCG
GTCCGGCGTT TCTACGGCTG GCACTTCACC GACTTCGCCG CCGGTGCCGC AGCAATGCGG
TACCTGGCCC AGAGCGCAAT ACGGCCGACG GTGCTGCGGC TGTCCGACGA GGCGGAGACC
GGTCTCAATC TGGCGAACCC CGGATCCGCG GGCACGGCCG ATGGCCCCGT CGGTGGGTGT
CTGATGATCG TCGGCTTCGA GGGCGACGAG CCCGACGTCG ACTGCCGGGA CGGCTACGTC
TCCGCGCGGC TGATCGAGCT GGGCGGCACG TTCCTCGGCG AGGGGCCCGG CGAGGCGTGG
CGTGTGGGAC GGTTCCGCGG CCCGTACCTC CGCGATCCAC TACTCGACGC CGGGGCTCTG
GTCGAGACGC TGGAGACCGT CACCTTCTGG TCCAATATCG ACCGGCTCAA AGCCGATGTC
ACCGCGGCGA TCACCGGCGC CCTCGGCGAC CAGGGCAGCC CCGCGGTAGT CATGTGTCAC
ATCTCGCACG TCTACCCGAC CGGGGCTTCG TTGTACTTCA CGGTGATCGC CAAAGCGCTA
CCGGATTCTT TGGCGCAGTG GACGATCGCC AAGCGGGCCG CGAACGCGGC GATCCGCGCG
GCCGGTGCCT CGATCACGCA TCACCACGCC GTCGGCGTCG ACCACCGTGC GACCTACCTG
GAGGAGATCG GCGACGTTCA GCTCGCGGCC CTGCGCGCCG TGAAGTCCGC GCTCGACCCG
CACGGTGTGC TCAACCCCGG GGTTCTGCTC CCGTGA
 
Protein sequence
MTSSEVELPV VAFEPGRWGD PATPMHLSDS VLGALTMLGI DGAPPEPITP VVAASRADES 
AVTALRATGA DVSTDQADRL RHLRGYSTPD LLRFRTGDAS DAPDVVVTAR TADQVTAVLR
VCGEAGFTLS PFAGGTAVTG GLAPERTRPV VALDLRGLTG LLDLDSVSQV ATLAAGTRLP
EAEKLLRERG FELGHFPQSY EGATIGGCAV TRSAGQSSIG YGRFDEMVVG LTVATPVGTS
EIGTAPKSAA GPDLRQLFLG SEGVFGVVTA VRVRVHPVPA VRRFYGWHFT DFAAGAAAMR
YLAQSAIRPT VLRLSDEAET GLNLANPGSA GTADGPVGGC LMIVGFEGDE PDVDCRDGYV
SARLIELGGT FLGEGPGEAW RVGRFRGPYL RDPLLDAGAL VETLETVTFW SNIDRLKADV
TAAITGALGD QGSPAVVMCH ISHVYPTGAS LYFTVIAKAL PDSLAQWTIA KRAANAAIRA
AGASITHHHA VGVDHRATYL EEIGDVQLAA LRAVKSALDP HGVLNPGVLL P