| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1956 |
|---|
| Symbol | |
|---|
| ID | 9156111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 2041918 |
|---|
| End bp | 2043480 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_003646907 |
|---|
| Protein GI | 296139664 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGAAA GATTCGCCGC CGCACTCGAG TCGGTGGACC CGCGCTCCCG GCTCGACGCG
ACGCGCCGCA AGGCCGACCT CGCCACCCTC GCCGACGACC CCGCCGTGGA CGTCCTGGTG
ATCGGCGGCG GAGTCACCGG CACCGGAGTA GCACTCGACG CCGCGAGCCG GGGACTATCG
GTGGCGCTGG TGGACAAGCA CGATCTGGCC TTCGGCACCA GCCGGTGGTC ATCGAAATTG
GTGCACGGCG GCCTGCGCTA CCTCGCCTCG GGTGCGGTGG GCATCGCACA TGAGAGCGCA
GTGGAACGCG ATGTCCTGAT CCGGTCGATA GCCCCGCACC TGACCCGCCC GCTCGCACAG
GTCGTGCCGC TGCTCGCCGA TGTTTCGACG TTCGACGCCG CACTCACCCG GGTCGGCTTC
CTCGCCGGCG ACGTCTTGCG CCGCGCCGCA GGCACTCCGG CTACGGAACT GGGCCGTTCG
CGACGCATCT CGGCCGCCGA AGTGATCCGC ATGGCACCGA CGGTCAAACG TGCGGGTCTG
CGTGGCGGCC TGCTCAATTG GGACGGCCAG CTCACCGACG ACGCCCGGCT CACCGTCGCG
ATCGCGCGCA CGGCCGCCGC GCACGGCGCG CGCATCCTCA CACACTGTGC CGCGTCACAG
GTCACGGGTA CGGCAGCGAC GGTGACCGAC GAGCTGACCG GCGCCAGCCG CGCGATCCGC
GCCCGCGCAG TGATCAATGC GACCGGGGTG TGGGCGGGCA CCGTCGACCC CGCGATCGCA
TTGCGGCCGA GCCGGGGCAC CCATCTGGTC TTCCGCCAGG ACGTCTTCGG CGGTCTCACC
GCCGGGCTGA CGGTGCCCGT CCCAGGTGCG TTCGGCCGGT ACGTCTTCGC ACTCCCCCAG
CCGGACGGGC GCATCTATGT GGGTCTGACC GACGAGGAGG CCGACGGTCC ACTGCCCGAC
GTGCCGACCG CGTCCGAGGA AGAGATCGAC TTCCTGCTGG CCACGGTCAG CCTCGCGCTC
GATACCCCCC TGCGCCGGGA CCACATCGCG GGTACCTTCG CCGGTCTTCG GCCGCTGTTG
GACTCCGGTG CAGGGCGGAC CGCGGACGTC TCACGCAAGC ACGCGGTTCT CACCCGTGGC
GACGGCTTGA TCACCGTGGT GGGGGGCAAG CTGACCACCT ACCGGCGGAT GGCGCAGGAC
GCCGTCGACG CGGCCGTCAC GGCCTCGGGC CTGCTCACCG GGCCCAGTGT GACCCGGTCG
GTGCCGCTCG TCGGCGCGGC GCCGCGAGGG GAGCTGGCCG CTGTCGCGGC ACCGCAGCGA
CTGGTGCACA AGTACGGCAC CGAGGCCACC GCCGTGGCCG CCCTCGCCGA GGTGCAGCCG
GCGCTGGCCG AGCCGGTGAC GGCAGGCACG GAGATCACCG GCGCCGAAAT GCTCTACGGC
GCACTCGTCG AGGGCGCCCT GACGGTCGAC GATCTTCTTG AACGCCGCAC CCGTCTCTCG
CTCATCCCCC ATGTCGCCGC GGCGGCGACG AGCTCTGCGG AGGCTGCGCT CGCGGCTCAA
TGA
|
|---|
| Protein sequence | MTERFAAALE SVDPRSRLDA TRRKADLATL ADDPAVDVLV IGGGVTGTGV ALDAASRGLS
VALVDKHDLA FGTSRWSSKL VHGGLRYLAS GAVGIAHESA VERDVLIRSI APHLTRPLAQ
VVPLLADVST FDAALTRVGF LAGDVLRRAA GTPATELGRS RRISAAEVIR MAPTVKRAGL
RGGLLNWDGQ LTDDARLTVA IARTAAAHGA RILTHCAASQ VTGTAATVTD ELTGASRAIR
ARAVINATGV WAGTVDPAIA LRPSRGTHLV FRQDVFGGLT AGLTVPVPGA FGRYVFALPQ
PDGRIYVGLT DEEADGPLPD VPTASEEEID FLLATVSLAL DTPLRRDHIA GTFAGLRPLL
DSGAGRTADV SRKHAVLTRG DGLITVVGGK LTTYRRMAQD AVDAAVTASG LLTGPSVTRS
VPLVGAAPRG ELAAVAAPQR LVHKYGTEAT AVAALAEVQP ALAEPVTAGT EITGAEMLYG
ALVEGALTVD DLLERRTRLS LIPHVAAAAT SSAEAALAAQ
|
|---|
| |