Gene Tpau_1949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1949 
Symbol 
ID9156104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp2035979 
End bp2036716 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content68% 
IMG OID 
Productbeta-lactamase domain protein 
Protein accessionYP_003646900 
Protein GI296139657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATCA CCGGATTCCC GGCGGGGGTG TTCCAGACCA ACTGCTACGT GCTCGCGGAG 
GGGCCGGGCG CCGACGCCGT CATCGTCGAC CCGGGGCAGG ACGCCGTCGA ATCGGTGAAG 
GCGCTGCTCG CCGAGCACCG CCTCAATCCC GTGGCCGTGC TGCTCACGCA CGGTCATCTG 
GACCACACCT GGACCGCGCA GCCGTTGGCC GATGAGTTCG GTATCCCGGT GTACATCCAC 
GCCGCCGACC GCCCCATGCT GGCCGATCCC GCGGTCGGCA TCGGTCCCGC TCTGGGGTCG 
ATGATCGGTG GTCAAATCTT CACAGAACCC GAGAAGGTCA TCGAGCTCGA CGACGGTGAA 
GCGGTCACAC TGGCGGGCAT CACGTTCGGC GTCGATCTGG CGCCCGGCCA CACCCGCGGG 
TCGATCGTCT TCACCACCGA GGTACCGCAG ATCGACGAGG CCGGGGAGCC GGTCGGCGCC 
GAGCCCGTGA TCGTCGCGTT CTCCGGCGAT GTGCTCTTCC AGGGTTCGAT CGGGCGTACC 
GATCTCCCCG GCGGCAGTCA CGAGCAACTG CTCGACTCGA TCGCGGCGAA ACTTCTCCCG 
CTCCCCGACG AGACCGTCGT ACTCCCGGGC CACGGCCCTG CTACCACCAT CGGGCAGGAG 
CGGGCGTCGA ACCCGTTCCT CCAGGGGCTC ACCGGGGCGC AGGCGCCCGG TGAGCGGAAA 
GGACGATTCG GACTGTGA
 
Protein sequence
MLITGFPAGV FQTNCYVLAE GPGADAVIVD PGQDAVESVK ALLAEHRLNP VAVLLTHGHL 
DHTWTAQPLA DEFGIPVYIH AADRPMLADP AVGIGPALGS MIGGQIFTEP EKVIELDDGE 
AVTLAGITFG VDLAPGHTRG SIVFTTEVPQ IDEAGEPVGA EPVIVAFSGD VLFQGSIGRT 
DLPGGSHEQL LDSIAAKLLP LPDETVVLPG HGPATTIGQE RASNPFLQGL TGAQAPGERK 
GRFGL