| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1933 |
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| Symbol | |
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| ID | 9156088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 2016156 |
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| End bp | 2017859 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | VanW family protein |
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| Protein accession | YP_003646885 |
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| Protein GI | 296139642 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.416962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTCGGA CTCGAACCTC GCTGCGCCGT GCCTCCGCAC TCGCCGTAGT CGGGGCCCTG
CTCCTCGGAG CGGGCGGAGC CGCGGTCTGG GAGAGCGGAC GCGCTGAAAC CGTCCACGGC
GCCACGGCGC TGGGCGTGAA GTTCGGCGGC GTGAGCCGTG ACGAGGCGAT CAACCGGCTG
CGCCCGGCGG CGCAGCAGGC AGCCACCGAG CAGGTCACGC TGCGCACGCC GAAGGGGTCG
GTGCGGTTCA GCCCGGAACA GCTGGGCCTG ACGATGGATG TCGAGGGCAC CGTCGATCAG
GCCATCCGCG ACCGAAATCC GGGTCGTGAC CTGATCGGGT ACGTCAAGCA GCGGCACGTG
CACCCCGCCG CGAACATCGA CCGCGGTACG TTCGACGCCG CGCTCACGAA GTCGACGCCC
GCGCTCACTT CGGCCGCGGG CGATGGCGCG GTGGTCTTCA AGGACGGCAA GCCGGTTCCC
GTGCTGCCCA AGCCCGGCGA CAAGATCAAC TTCGATGAGG CGGCGAAGGC GGTGCTCGAA
GCCTGGCCGG ACACCACCGA CATCGGTGTC CCCACCGAGA ACGTGCGCCC CACCGTCTCC
GAGCAGATGG TCCGGTCGGT GGCCTCCGGT GCGGCGGCGC GCGCGGTCGC CTCACCCGTC
GCACTGCGCA AAGACGGCGC ACCCAATGCC GACCCGACTA CTGTCGGCCG GCTCAGCGGT
GACGACATCG GGACGTTCCT ATCGTTCCAG CCCGACGGCG AGGGGCAGCT CAAGCCCACG
GTCGACCGTG ATGCCGCGCG CAAGGTTCTC GGTACGCGCC TCGAGTCGGC GGTGTCCAAG
CCGAAGGACG CGTCCTTCTC GCTGTCCGGA GGGGCGCCGA CGATCACCGC GGCGGTACCC
GGCAGCGAGG TGGTCTGGGA TCCGACCATC GACGCGGTCG CCAAGGCCGT CAACCAGCGC
GACGACGCGA ACCGCGAAGC CACCGCGCAG TTCAAGACCG TAGAACCGAA GATCACCACC
AAACGCGCGA ACGAACTCGG CGTCAAGGAG GTGGTGAGCG AGTTCTCCAC CGGTGGCTTC
AGTGATGCCT CCGGTGTGAA CATCCGGCGG GTCGCACAGC AGGTCAACGG TGCGGTGATC
CTGCCGGGAG AGACCTTCTC GCTCAACGGG TACACCGGGC CCCGCGGTAC CGCGCAGGGA
TACGTGGAAT CGGGCATCAT CAACAACGGC CGCCCCGATA AGGCCGTCGG CGGCGGTATC
TCACAGTTCG CGACCACGCT GTACAACGCC GCGTACTTCG CCGGGCTCGC CGACGCCGGC
CACACCGAGC ACAGCTACTA CATCTCCCGG TACCCGGAGG CACGCGAGGC CACCGTCTTC
GAGGGCTCGA TCGACCTGAA GTTCACCAAC GACACCCCGT ACGGCGTGGT GATCGAGTCG
AGCGCCGGCT CGTCGTCGGT GTCGGTGCGG ATGTGGAGCA CCAAGACCCG GTCGGTCGAG
TCCATCAAGG GCGAGCGCAG CGCATCCACC GAACCGTCGA CCATCCGTCT GCCGAAGGGC
CCGCACTGCG TGGCCAGCAC CGGGCAGCCC GGCTTCACCA CCAGCAACAC CCGGGTGATC
ACCGATGCCC GGACGGGGAA CCTGATCTCG CGGAACACCC GGACCGTGAA GTACGACCCG
GTGCCCACCG TCATCTGCGA GTAG
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| Protein sequence | MTRTRTSLRR ASALAVVGAL LLGAGGAAVW ESGRAETVHG ATALGVKFGG VSRDEAINRL
RPAAQQAATE QVTLRTPKGS VRFSPEQLGL TMDVEGTVDQ AIRDRNPGRD LIGYVKQRHV
HPAANIDRGT FDAALTKSTP ALTSAAGDGA VVFKDGKPVP VLPKPGDKIN FDEAAKAVLE
AWPDTTDIGV PTENVRPTVS EQMVRSVASG AAARAVASPV ALRKDGAPNA DPTTVGRLSG
DDIGTFLSFQ PDGEGQLKPT VDRDAARKVL GTRLESAVSK PKDASFSLSG GAPTITAAVP
GSEVVWDPTI DAVAKAVNQR DDANREATAQ FKTVEPKITT KRANELGVKE VVSEFSTGGF
SDASGVNIRR VAQQVNGAVI LPGETFSLNG YTGPRGTAQG YVESGIINNG RPDKAVGGGI
SQFATTLYNA AYFAGLADAG HTEHSYYISR YPEAREATVF EGSIDLKFTN DTPYGVVIES
SAGSSSVSVR MWSTKTRSVE SIKGERSAST EPSTIRLPKG PHCVASTGQP GFTTSNTRVI
TDARTGNLIS RNTRTVKYDP VPTVICE
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