Gene Tpau_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1920 
Symbol 
ID9156075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp2004019 
End bp2004567 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content64% 
IMG OID 
Producthistidine triad (HIT) protein 
Protein accessionYP_003646872 
Protein GI296139629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.629691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGACG AATCCAGCGA CGCACACCGC GATTTCGGTG TGGGTGACGG CGATGAGAGC 
ATCGAACGGC TGTGGACGCC GTACCGGATG CGATACCTCG TCGACACCCC TCCCGTCCCC 
GAGGGCAGCA CCGCCTTCCT GGAGATCCCC AAGCTGGCCG ACGAGGACGG CCTCATCGTT 
GCCCGCGGCG AACACTGCTA CGTGGTGCTG AACCTGTTCC CGTACAACCC GGGTCATTGC 
ATGGTGGTTC CGTATCGTCA GGTCGCCGAT CTCGAGGAGC TGACCGACGA CGAGGCCTTC 
GAACTGATCA AGCTCACCCA GAAGACGATC CGAGTGATCA AGCGGATCTC TCGGCCCGCC 
GCGTTCAACG TGGGCTTCAA CCTGGGCCGC TCGGGCGGTG GTTCGATCGC CGAGCACCTG 
CACCAACACA TCGTGCCGCG CTGGCCCGGC GATGCGAACT ACATCACGGT GCTCTCGGGC 
ACTAAGGTGA TGCCGCAGCT TCTGGGACAG ACCCGGGCGC TCATGGCGAA GGCCTGGGAG 
GAGGTCTAG
 
Protein sequence
MVDESSDAHR DFGVGDGDES IERLWTPYRM RYLVDTPPVP EGSTAFLEIP KLADEDGLIV 
ARGEHCYVVL NLFPYNPGHC MVVPYRQVAD LEELTDDEAF ELIKLTQKTI RVIKRISRPA 
AFNVGFNLGR SGGGSIAEHL HQHIVPRWPG DANYITVLSG TKVMPQLLGQ TRALMAKAWE 
EV