Gene Tpau_1919 details

Gene Information

• Locus tag: Tpau_1919
• ID: 9156074
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2001954
• End bp: 2003987
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 65%
• Product: threonyl-tRNA synthetase
• Protein accession: YP_003646871
• Protein GI: 296139628

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.615568
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCACCA CCTTCGTCGT CCCCGCCGGA ATCGCCGCCG GGGCCGCCAT GCGCGAGCTG 
GATCTTCCCA ACAAGGGCCC CGAGGCCGTC GTGGTGGTGA AGACGACCGA CGGCACCCTC 
AAGGACCTCA GCTGGGTCCC GGAGACCGAC ACCGAGGTCG AGGCCGTGGC GGCGAACACC 
GACGACGGCC GCAATGTGAT CCGGCACTCC GCGGCGCATG TTCTGGCGCA AGCGGTTCAG 
GACGGCTTCC CCGGTACCAA GCTCGGGATC GGCCCGTACA TCACGGACGG TTTCTACTAC 
GACTTCGACG TTGCCGAGCC GTTCACCCCC GAGGATCTGA AGAACCTCGA GAAGAAGATG 
AAGCAGATCA TCAAGGCGGG TCAGAAGTTC AGCCGCCGTG TCTACGCGAG CAAGGACGAG 
GCCCGCGCCG AGCTGGCGGG AGAGCCGTAC AAGCTCGAGT TGATCGACGA CAAGGGCGCT 
GCCGACGACA GCGAGGTCAT GGAGGTCGGC GGGGCCGAAC TGACCGCGTA TGACAATCTC 
AATCCCCGTA CCGGCGAACG GATCTGGGGT GATCTGTGCC GCGGACCGCA CGTGCCCACC 
ACCAAGTACA TCCCGGCCGT GAAGCTCACC CGTAGCTCCG CGGCGTATTG GCGTGGCGAC 
CAGAACAACG CCGACCTTCA GCGCATTTAC GGCACCGCAT GGGAGTCCCC GGAGGCACAG 
GACGAATACC TGGAGCTGCT GGCCGAGGCG GAGAAGCGCG ACCACCGCCG GCTCGGTGCC 
GAGCTGGACC TGTTCAGCTT CCCCGACGCC CTCGGTTCCG GCCTGCCGGT GTTCCACCCC 
AAGGGCGGCA TCATCCGCAA GGAACTGGAG GAGTACTCGC GGCAGCGTCA TGTGGACGCC 
GGGTACGAGT TCGTCAACAC CCCGCACCTC ACTAAGAGCG CTCTCTACGA GGTCTCGGGG 
CACCTCGATT GGTACAAGGA CGGCATGTTC CCGGCCATGC ACCTCGACGC CGAGTACGAC 
GACGAGGGCA ACGTCACCAA GCCCGGCCAG GACTACTACG TCAAGCCGAT GAACTGCCCG 
ATGCACAATC TGATCTTCGA CGCCCGCGGC CGGTCGTACC GGGAACTGCC GTTGCGGCTC 
TTCGAGTTCG GCTCCGTCTA CCGGTATGAG AAGTCCGGGG TGATTCACGG CCTGACTCGG 
GTGCGCGGAA TGACTCAGGA CGATGCGCAC ATCTACTGCA CTAAGGAGCA GATGCATGGC 
GAACTCACCA CGACCTTGAA GTTCGTGCTG TCGCTGCTCA AGGACTACGG CCTCGATGAC 
TTCTACCTGG AGCTGTCGAC CAAGAATCCC GAGAAGTACG TTGGCGACGA CGACGTCTGG 
GAAGAAGCCA CCAAGACCTT GCAGCAGGTT GCCGAAGCCT CGGGCCTCGA CCTGGTACCC 
GATCCGGGCG GCGCCGCCTT CTACGGGCCG AAGATCTCGG TGCAGGCGAA GGACGCCCTG 
GGGCGTACCT GGCAGATGTC GACGATCCAG CTCGACTTCA ACCTGCCCGA GCGGTTCGAG 
CTCGAGTACA CCGCGCCGGA CGGCACCAAA CAGCGTCCGG TGATGATCCA CCGCGCTCTG 
TTCGGTTCCA TCGAGCGGTT CTTCGGTGTG CTCACCGAGC ACTACGCGGG TGCGTTCCCG 
GCGTGGCTGG CACCCGAGCA GGTCGTCGGC ATCCCCGTGG CTGAGCAGTT CGGCGATCAC 
TTGGAGACCG TGATCCGCAA ACTCCGTGCC GAAGGCATCC GCGCCCACGT CGACCACAGC 
GACGATCGGA TGCAGAAGAA GATCCGCAAC CACACCACCC AAAAGGTTCC GTTCATGCTG 
CTGGCGGGGG AGCGCGATCG CGAAGCCGGT GCCGTCAGCT TCCGGTTCCG CGACGGCACC 
CAGGTCAACG AGGTCCCCGT CGACGATGCC GTCCAGCGGA TCGTGGAGTG GGTGCGCGCG 
CGTCGCAATG AATCGCCGAC GGCCGAGCTG CTGGGCACCG TCGTCACGCC CTGA 

 

Protein sequence

MSTTFVVPAG IAAGAAMREL DLPNKGPEAV VVVKTTDGTL KDLSWVPETD TEVEAVAANT 
DDGRNVIRHS AAHVLAQAVQ DGFPGTKLGI GPYITDGFYY DFDVAEPFTP EDLKNLEKKM 
KQIIKAGQKF SRRVYASKDE ARAELAGEPY KLELIDDKGA ADDSEVMEVG GAELTAYDNL 
NPRTGERIWG DLCRGPHVPT TKYIPAVKLT RSSAAYWRGD QNNADLQRIY GTAWESPEAQ 
DEYLELLAEA EKRDHRRLGA ELDLFSFPDA LGSGLPVFHP KGGIIRKELE EYSRQRHVDA 
GYEFVNTPHL TKSALYEVSG HLDWYKDGMF PAMHLDAEYD DEGNVTKPGQ DYYVKPMNCP 
MHNLIFDARG RSYRELPLRL FEFGSVYRYE KSGVIHGLTR VRGMTQDDAH IYCTKEQMHG 
ELTTTLKFVL SLLKDYGLDD FYLELSTKNP EKYVGDDDVW EEATKTLQQV AEASGLDLVP 
DPGGAAFYGP KISVQAKDAL GRTWQMSTIQ LDFNLPERFE LEYTAPDGTK QRPVMIHRAL 
FGSIERFFGV LTEHYAGAFP AWLAPEQVVG IPVAEQFGDH LETVIRKLRA EGIRAHVDHS 
DDRMQKKIRN HTTQKVPFML LAGERDREAG AVSFRFRDGT QVNEVPVDDA VQRIVEWVRA 
RRNESPTAEL LGTVVTP