Gene Tpau_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1908 
Symbol 
ID9156058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1993400 
End bp1994263 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content63% 
IMG OID 
Productmembrane protein insertase, YidC/Oxa1 family 
Protein accessionYP_003646860 
Protein GI296139617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.339589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGATG TCGTCTATTA CCCGATTTCC GCCCTGCTCT GGCTCTGGCA CCGCGTGTTC 
GGTGCGTTCC TGGGCGCCGA CAACGGATTC GCCTGGGCAT TGTCCGTGGT CTTCTTGGTC
TTCACCGTTC GTGCCGTGCT GCTCTGGCCG GGCCTCGTGT CCGCCCGGGC CGGGCGGCGC
CTGGAGAGGA TGCGCCCCGA ATTGGACAAG CTGCGCAGGA AACACGGAAA AGACCCGCAG
AAACTCGCAC TGGAAACGCA AAAGCTCCAG CGCGAGCACG GTGTTCGTCC GTTGCTCGGC
TGCCTCCCAG CACTGGCGCA GATCCCCGTC TTCTTCGGGC TCTATCACGT TCTTCGATCG
TTCAACCGCA CCGGCACTGG GCTCGGACAG CTCGGGCTCA CCCCGGACCA GAACGCGAAC
ACCGCGAACT ACGTGTTCTC GGCTACCGAT GTGCAGTCCT TCCTCAGCGC TCGACTGTTC
GGCGCGCCGA TCTCGGTCTC CATATCCAGT TCCGACACCG TCCTTGCTTC GTTCGCGCAG
TTCGGCGGCA TTCCTAGTCT GACGACGATC GCCGCGGTCG CGATTCCGCT CATGGCGATC
GCCTGCCTCG CCACGCACAT CAATGCGCGG TTTTCGGTCC GGCACCAGGC CATCGACCCC
ACGAGTGCAA TGCAGTCCGA CCTGATGCGC ACGCTGATGC TGTGGGTGAT GCCGCTGGGC
AGCATCATCA GCGGCCCGAT CCTGCCGATC GCCATCCTGC TGTACTGGGT CGCGAACAAC
GTGTGGACCT ACGGCCAGCA GCAACTTGTG CACTTCGTGC TGGAACGGGA GGAACGAACG
CCAGTGTCCT CACGTTCGTC GTGA
 
Protein sequence
MLDVVYYPIS ALLWLWHRVF GAFLGADNGF AWALSVVFLV FTVRAVLLWP GLVSARAGRR 
LERMRPELDK LRRKHGKDPQ KLALETQKLQ REHGVRPLLG CLPALAQIPV FFGLYHVLRS
FNRTGTGLGQ LGLTPDQNAN TANYVFSATD VQSFLSARLF GAPISVSISS SDTVLASFAQ
FGGIPSLTTI AAVAIPLMAI ACLATHINAR FSVRHQAIDP TSAMQSDLMR TLMLWVMPLG
SIISGPILPI AILLYWVANN VWTYGQQQLV HFVLEREERT PVSSRSS